Disease: Schizophrenia
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs6265
BDNF ; BDNF-AS
0.436 0.760 11 27658369 missense variant C/T snv 0.19 0.15 272
rs1800562
LOC108783645 ; HFE
0.435 0.880 6 26092913 missense variant G/A snv 3.3E-02 3.8E-02 262
rs4680
COMT ; MIR4761
0.442 0.920 22 19963748 missense variant G/A snv 0.46 0.44 249
rs759834365
BDNF-AS ; BDNF
0.448 0.760 11 27658456 missense variant C/T snv 1.2E-05 237
rs671
ALDH2
0.529 0.840 12 111803962 missense variant G/A snv 1.9E-02 5.8E-03 116
rs5443
CDCA3 ; GNB3
0.532 0.760 12 6845711 synonymous variant C/T snv 0.36 0.44 106
rs9939609
FTO
0.559 0.720 16 53786615 intron variant T/A snv 0.41 98
rs1799971
OPRM1
0.559 0.600 6 154039662 missense variant A/G snv 0.19 0.12 95
rs6313
HTR2A
0.562 0.640 13 46895805 synonymous variant G/A snv 0.41 0.40 82
rs25531
SLC6A4 ; LOC105371720
0.581 0.520 17 30237328 upstream gene variant T/C snv 0.18 72
rs6280
DRD3
0.602 0.520 3 114171968 missense variant C/T snv 0.63 0.54 57
rs324420
FAAH
0.637 0.440 1 46405089 missense variant C/A snv 0.24 0.26 48
rs16969968
CHRNA5
0.653 0.360 15 78590583 missense variant G/A snv 0.26 0.24 37
rs6277
DRD2
0.689 0.480 11 113412737 synonymous variant G/A snv 0.41 0.38 36
rs13107325
SLC39A8
0.776 0.520 4 102267552 missense variant C/A;T snv 4.0E-06; 4.5E-02 34
rs1801028
DRD2
0.716 0.200 11 113412762 missense variant G/C snv 2.7E-02 1.8E-02 24
rs6296
HTR1B ; LOC105377864
0.732 0.160 6 77462543 synonymous variant C/G snv 0.31 0.27 23
rs3782886
BRAP
0.724 0.480 12 111672685 synonymous variant T/C snv 1.9E-02 5.9E-03 22
rs11558538
LOC107985948 ; HNMT
0.695 0.400 2 138002079 missense variant C/T snv 1.0E-01 8.4E-02 19
rs5569
SLC6A2
0.742 0.280 16 55697923 synonymous variant G/A;C snv 0.31; 4.0E-06 19
rs1611115
DBH
0.732 0.280 9 133635393 upstream gene variant T/C snv 0.80 16
rs2501432
CNR2
0.716 0.480 1 23875430 missense variant T/C;G snv 0.62 16
rs1800532
TPH1
0.763 0.160 11 18026269 intron variant G/T snv 0.33 15
rs7103411
BDNF ; BDNF-AS
0.752 0.160 11 27678578 intron variant C/T snv 0.82 15