Disease: Prostate carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs700519
MIR4713HG ; CYP19A1
0.752 0.280 15 51215771 missense variant G/A snv 7.6E-02 8.0E-02 11
rs2077647
ESR1
0.732 0.320 6 151807942 synonymous variant T/A;C snv 8.1E-06; 0.46 16
rs2333227
MPO
0.752 0.320 17 58281401 upstream gene variant C/T snv 0.24 15
rs7483
GSTM3 ; GSTM5
0.742 0.320 1 109737079 missense variant C/T snv 4.0E-06; 0.35 0.26 11
rs743572
CYP17A1
0.672 0.360 10 102837395 5 prime UTR variant A/G;T snv 0.40; 8.1E-06 24
rs10046
MIR4713HG ; CYP19A1
0.708 0.400 15 51210789 3 prime UTR variant G/A snv 0.45 0.43 18
rs57095329
MIR3142HG
0.677 0.480 5 160467840 intron variant A/G snv 7.8E-02 25
rs1138272
GSTP1
0.611 0.600 11 67586108 missense variant C/T snv 5.9E-02 5.5E-02 42
rs20417
PACERR ; PTGS2
0.576 0.600 1 186681189 non coding transcript exon variant C/G;T snv 57
rs4986938
ESR2
0.641 0.600 14 64233098 3 prime UTR variant C/T snv 0.31 0.33 35
rs2236225
MTHFD1
0.614 0.640 14 64442127 missense variant G/A snv 0.44 0.38 52
rs689466
PACERR ; PTGS2
0.637 0.640 1 186681619 upstream gene variant T/C snv 0.17 33
rs1001179
CAT
0.641 0.680 11 34438684 upstream gene variant C/T snv 0.16 33
rs1570360
VEGFA
0.641 0.680 6 43770093 upstream gene variant A/G snv 0.76 38
rs1799724
LTA ; TNF
0.600 0.680 6 31574705 upstream gene variant C/T snv 8.5E-02 47
rs1799864
CCR2
0.572 0.680 3 46357717 missense variant G/A snv 0.13 0.12 68
rs187238
IL18
0.602 0.680 11 112164265 intron variant C/A;G snv 48
rs2231142
ABCG2
0.583 0.680 4 88131171 missense variant G/C;T snv 4.0E-06; 0.12 56
rs2234693
ESR1
0.555 0.680 6 151842200 intron variant T/C snv 0.47 77
rs699947
VEGFA
0.570 0.680 6 43768652 upstream gene variant A/C;T snv 67
rs9340799
ESR1
0.583 0.680 6 151842246 intron variant A/G snv 0.32 62
rs1130409
APEX1
0.555 0.720 14 20456995 missense variant T/A;C;G snv 4.0E-06; 4.0E-06; 0.42 72
rs25489
XRCC1
0.550 0.720 19 43552260 missense variant C/G;T snv 8.5E-06; 7.1E-02 78
rs9939609
FTO
0.559 0.720 16 53786615 intron variant T/A snv 0.41 98
rs1136410
PARP1
0.559 0.760 1 226367601 missense variant A/G snv 0.21 0.15 70