DisGeNET - a database of gene-disease associations

List of shared variants

Amyotrophic Lateral Sclerosis, C0002736

Disease: Parkinson Disease

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1130409	APEX1	0.555	0.720	14	20456995	missense variant	T/A;C;G	snv	4.0E-06; 4.0E-06; 0.42		72
rs11558538	LOC107985948 ; HNMT	0.695	0.400	2	138002079	missense variant	C/T	snv	1.0E-01	8.4E-02	19
rs11701	RNASE4 ; ANG	0.925	0.080	14	20693894	synonymous variant	T/A;C;G	snv	4.0E-06; 0.14		2
rs11868035	RAI1 ; SREBF1	0.763	0.200	17	17811787	splice region variant	G/A	snv	0.45	0.33	14
rs1217691063	MTHFR	0.330	0.920	1	11796309	missense variant	A/G	snv	4.0E-06	7.0E-06	614
rs121909329	VCP	0.763	0.200	9	35065363	missense variant	C/A;G;T	snv			11
rs121909330	VCP	0.752	0.200	9	35065364	missense variant	G/A;C;T	snv			11
rs121909334	VCP	0.752	0.200	9	35065255	missense variant	C/T	snv	1.6E-05		10
rs121912438	SOD1	0.605	0.520	21	31667299	missense variant	G/A;C;T	snv	1.2E-05; 8.0E-06		58
rs121912443	SOD1	0.732	0.160	21	31663857	missense variant	A/G	snv			15
rs142444896	CHCHD2	0.807	0.120	7	56106409	missense variant	G/A	snv	9.3E-03	7.5E-03	6
rs148156462	COQ2	0.925	0.080	4	83264287	missense variant	A/G	snv	4.2E-03	1.6E-03	3
rs1572931	RAB29 ; LOC105371702	0.925	0.080	1	205775090	splice region variant	C/A;T	snv		0.14	2
rs17571	CTSD	0.827	0.120	11	1761364	missense variant	G/A	snv	7.0E-02	6.2E-02	6
rs1799945	LOC108783645 ; HFE	0.452	0.760	6	26090951	missense variant	C/G;T	snv	0.11	0.10	226
rs1800562	LOC108783645 ; HFE	0.435	0.880	6	26092913	missense variant	G/A	snv	3.3E-02	3.8E-02	262
rs2275294	ZNF512B	0.925	0.080	20	63962894	intron variant	G/A	snv		0.25	3
rs267606929	OPTN	0.827	0.120	10	13132098	missense variant	A/G	snv			5
rs2736990	SNCA	0.882	0.080	4	89757390	intron variant	G/A;T	snv			4
rs34016896	LOC105374187	0.925	0.080	3	161275076	regulatory region variant	C/T	snv		0.28	3
rs356220	LOC105377329 ; SNCA	0.925	0.080	4	89720189	intron variant	T/A;C	snv			3
rs35801418	LRRK2	0.827	0.120	12	40321114	missense variant	A/G	snv			7
rs367543041	TARDBP	0.742	0.200	1	11022553	missense variant	G/A;C	snv	3.0E-05		15
rs3732378	CX3CR1	0.620	0.720	3	39265671	missense variant	G/A	snv	0.14	0.12	48
rs3732379	CX3CR1	0.637	0.680	3	39265765	missense variant	C/T	snv	0.22	0.22	38