Disease: Crohn Disease
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs4986790
TLR4
0.438 0.800 9 117713024 missense variant A/G;T snv 6.1E-02; 4.0E-06 223
rs2910164
MIR3142HG ; MIR146A
0.447 0.880 5 160485411 mature miRNA variant C/G snv 0.71; 4.1E-06 0.70 193
rs1800629
TNF
0.472 0.920 6 31575254 upstream gene variant G/A snv 0.12 0.14 169
rs1801282
PPARG
0.500 0.840 3 12351626 missense variant C/G snv 0.11 8.9E-02 131
rs1805192
PPARG
0.510 0.840 3 12379739 missense variant C/G snv 121
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 121
rs2275913
IL17A
0.514 0.760 6 52186235 upstream gene variant G/A snv 0.28 105
rs763780
IL17F
0.531 0.720 6 52236941 missense variant T/C snv 6.7E-02 6.6E-02 87
rs361525
TNF
0.562 0.760 6 31575324 upstream gene variant G/A snv 4.6E-02 62
rs2066844
NOD2
0.587 0.520 16 50712015 missense variant C/T snv 2.6E-02 2.9E-02 54
rs1799724
LTA ; TNF
0.600 0.680 6 31574705 upstream gene variant C/T snv 8.5E-02 47
rs11209026
IL23R
0.597 0.680 1 67240275 missense variant G/A snv 4.2E-02 4.6E-02 46
rs2066845
NOD2
0.611 0.600 16 50722629 missense variant G/C;T snv 1.1E-02; 2.2E-04 46
rs744166
STAT3
0.689 0.560 17 42362183 intron variant A/G snv 0.48 22
rs2201841
C1orf141 ; IL23R
0.716 0.440 1 67228519 intron variant A/G;T snv 14
rs30187
ERAP1
0.732 0.360 5 96788627 missense variant T/A;C snv 0.62 14
rs6887695 0.732 0.440 5 159395637 intron variant G/C snv 0.35 14
rs7530511
IL23R ; C1orf141
0.742 0.400 1 67219704 missense variant T/A;C snv 0.88 12
rs12188300 0.807 0.120 5 159402519 intron variant A/G;T snv 6
rs4921482
LOC285626
0.807 0.120 5 159337470 intron variant T/C;G snv 6
rs74817271
TNIP1
0.807 0.120 5 151090412 intron variant G/A snv 5.0E-02 6
rs10865331 0.827 0.120 2 62324337 intergenic variant A/G snv 0.57 5
rs2248374
ERAP1 ; ERAP2
0.851 0.120 5 96900192 splice region variant A/G snv 0.55 0.54 4
rs2631367
MIR3936HG ; SLC22A5
0.925 0.120 5 132369766 5 prime UTR variant C/G snv 0.59 4