Disease: Autoimmune Diseases
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs104895271
TNFRSF1A
0.851 0.240 12 6334161 missense variant A/C;G snv 1.6E-04; 4.8E-05 6
rs10516487
BANK1
0.752 0.360 4 101829919 missense variant G/A;T snv 0.26; 8.0E-06 11
rs1059702
IRAK1
0.807 0.280 X 154018741 missense variant A/G snv 0.72 7
rs1059703
IRAK1
0.851 0.280 X 154013378 missense variant G/A snv 0.67 6
rs11221332
ETS1
0.763 0.280 11 128511079 intron variant C/A;T snv 13
rs13447
NCF1C
0.882 0.200 7 75166663 non coding transcript exon variant T/A;C snv 1.9E-02 4
rs1378942
CSK
0.790 0.240 15 74785026 intron variant C/A;T snv 16
rs147846074
AIRE
0.925 0.200 21 44289743 missense variant C/G;T snv 1.2E-05; 3.2E-05; 4.0E-06 3
rs1800520
AIRE
0.851 0.200 21 44290023 missense variant C/A;G;T snv 0.14; 8.3E-06 5
rs1801274
FCGR2A
0.597 0.800 1 161509955 missense variant A/C;G snv 4.0E-06; 0.48 46
rs1980422 0.776 0.320 2 203745673 intergenic variant C/A;T snv 9
rs201802880
NCF1
0.882 0.200 7 74779296 missense variant G/A snv 1.1E-03 4
rs2229080
DCC
0.742 0.320 18 52906232 missense variant C/A;G snv 0.45 16
rs231775
CTLA4
0.504 0.720 2 203867991 missense variant A/G;T snv 0.42; 4.0E-06 115
rs2488457
AP4B1-AS1 ; PTPN22
0.763 0.480 1 113872746 intron variant G/A;C snv 11
rs28362491
LOC105377621 ; NFKB1
0.592 0.720 4 102500998 non coding transcript exon variant ATTG/- delins 56
rs3027898
IRAK1
0.752 0.360 X 154010439 downstream gene variant C/A snv 11
rs34933034
CSK
0.925 0.120 15 74787133 intron variant G/A;T snv 3
rs3731865
SLC11A1
0.882 0.160 2 218385280 non coding transcript exon variant G/A;C;T snv 0.23; 1.4E-04 5
rs3761959
FCRL3
0.827 0.320 1 157699488 intron variant C/A;G;T snv 7
rs3789604
RSBN1 ; AP4B1-AS1
0.776 0.360 1 113812320 synonymous variant T/A;C;G snv 8.5E-06; 1.3E-05; 0.17 9
rs396991
FCGR3A
0.742 0.480 1 161544752 missense variant A/C;G;T snv 0.33; 4.1E-06 14
rs4750316
LINC02649 ; LINC02656
0.882 0.160 10 6351298 non coding transcript exon variant C/G;T snv 5
rs4810485
CD40
0.732 0.480 20 46119308 intron variant T/A;G snv 16
rs555743307
IL4R
0.695 0.440 16 27342243 missense variant G/A;T snv 3.6E-05; 2.9E-04 20