Disease: Lupus Erythematosus, Systemic
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs9603612
COG6
0.925 0.120 13 39760715 intron variant C/G snv 0.30 2
rs9357152 0.827 0.240 6 32697183 regulatory region variant A/G snv 0.24 5
rs9277535
HLA-DPB1
0.724 0.440 6 33087084 3 prime UTR variant A/G snv 0.25 13
rs9275572 0.724 0.360 6 32711222 upstream gene variant A/G;T snv 15
rs9275428 0.925 0.120 6 32703201 downstream gene variant A/C;G snv 2
rs9275328 0.851 0.240 6 32699045 intergenic variant C/T snv 0.16 4
rs9275141 0.827 0.240 6 32683340 intergenic variant T/G snv 0.50 6
rs9271366 0.807 0.240 6 32619077 intergenic variant G/A snv 0.86 9
rs9268832
HLA-DRB9
0.882 0.160 6 32460012 non coding transcript exon variant T/C snv 0.61 0.59 4
rs9267531
LY6G5B ; CSNK2B
0.882 0.120 6 31668965 non coding transcript exon variant A/G snv 7.5E-02 3
rs922483
BLK
0.882 0.200 8 11494403 5 prime UTR variant C/T snv 0.31 3
rs9138
SPP1
0.776 0.360 4 87983190 3 prime UTR variant A/C;T snv 12
rs911263
RAD51B
0.851 0.200 14 68286876 intron variant C/T snv 0.57 4
rs909253
LTA ; LOC100287329
0.641 0.600 6 31572536 intron variant A/G;T snv 34
rs907715
IL21
0.752 0.520 4 122613898 intron variant C/T snv 0.35 11
rs906868 0.925 0.120 2 30225478 intergenic variant G/T snv 0.53 4
rs878854066
TP53
0.439 0.800 17 7676153 missense variant GG/AC mnv 213
rs878081
AIRE
0.882 0.200 21 44288394 synonymous variant C/T snv 0.21 0.19 3
rs854560
PON1
0.513 0.800 7 95316772 missense variant A/C;G;N;T snv 0.29 113
rs8193037
IL17A
0.752 0.320 6 52186311 upstream gene variant G/A;T snv 12
rs8193036
IL17A
0.689 0.600 6 52185695 upstream gene variant C/T snv 0.72 21
rs8177374
TIRAP
0.672 0.520 11 126292948 missense variant C/T snv 0.12 0.11 22
rs802791
ATG5
0.851 0.160 6 106121395 intron variant T/C snv 0.75 4
rs800292
CFH
0.645 0.560 1 196673103 missense variant G/A snv 0.32 0.40 33
rs799454
SRP54-AS1
0.882 0.200 14 34927973 intron variant A/G snv 0.45 3