Disease: Arthritis
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10499194 0.752 0.400 6 137681500 intron variant C/T snv 0.24 10
rs1057523354
COL4A1
0.763 0.480 13 110179387 missense variant C/A snv 13
rs1061622
TNFRSF1B
0.633 0.760 1 12192898 missense variant T/G snv 0.22 0.22 33
rs1143679
ITGAM
0.732 0.520 16 31265490 missense variant G/A snv 9.7E-02 0.11 14
rs11614913
HOXC6 ; MIR196A2
0.512 0.760 12 53991815 mature miRNA variant C/T snv 0.39 0.34 111
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs1234315
TNFSF4
0.807 0.400 1 173209324 upstream gene variant C/T snv 0.57 6
rs13277113
BLK
0.695 0.520 8 11491677 intron variant G/A snv 0.25 18
rs1477353313
ACR
0.925 0.120 22 50744085 missense variant T/G snv 2
rs1799945
LOC108783645 ; HFE
0.452 0.760 6 26090951 missense variant C/G;T snv 0.11 0.10 226
rs1800562
LOC108783645 ; HFE
0.435 0.880 6 26092913 missense variant G/A snv 3.3E-02 3.8E-02 262
rs1800925
IL13 ; TH2LCRR
0.627 0.560 5 132657117 non coding transcript exon variant C/G;T snv 37
rs204989
GPSM3
0.925 0.120 6 32194075 intron variant G/A snv 0.21 2
rs204991
GPSM3
0.882 0.200 6 32193589 intron variant T/C snv 0.21 3
rs2070600
AGER
0.561 0.760 6 32183666 missense variant C/T snv 5.3E-02 3.6E-02 82
rs2228570
VDR
0.521 0.760 12 47879112 start lost A/C;G;T snv 0.63 99
rs2230926
TNFAIP3
0.662 0.440 6 137874929 missense variant T/C;G snv 4.0E-06; 5.4E-02 27
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 121
rs2501432
CNR2
0.716 0.480 1 23875430 missense variant T/C;G snv 0.62 16
rs2910164
MIR3142HG ; MIR146A
0.447 0.880 5 160485411 mature miRNA variant C/G snv 0.71; 4.1E-06 0.70 193
rs35761398
CNR2
0.701 0.520 1 23875429 missense variant TT/CC mnv 19
rs3743930
MEFV
0.611 0.720 16 3254626 missense variant C/G;T snv 7.1E-02 43
rs3746444
MIR499A ; MIR499B ; MYH7B ; LOC107985393
0.514 0.760 20 34990448 mature miRNA variant A/G snv 0.20 0.19 105
rs3789604
RSBN1 ; AP4B1-AS1
0.776 0.360 1 113812320 synonymous variant T/A;C;G snv 8.5E-06; 1.3E-05; 0.17 9
rs3890733
VDR
0.882 0.120 12 47895590 intron variant C/T snv 0.27 3