Disease: Liver carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2647012 0.790 0.320 6 32696681 intergenic variant T/C snv 0.64 7
rs2856683 0.827 0.320 6 32687441 regulatory region variant T/A;C;G snv 0.25 5
rs3135363 0.776 0.360 6 32421871 intergenic variant A/G snv 0.24 8
rs5000634 0.851 0.200 6 32695787 intergenic variant A/G snv 0.39 4
rs6457617 0.763 0.480 6 32696074 intergenic variant C/A;T snv 11
rs7774434 0.807 0.360 6 32689801 TF binding site variant T/C snv 0.40 6
rs9275312 0.807 0.280 6 32697951 intergenic variant A/G snv 0.16 6
rs9275572 0.724 0.360 6 32711222 upstream gene variant A/G;T snv 15
rs1045642
ABCB1
0.456 0.840 7 87509329 synonymous variant A/G;T snv 0.50 214
rs1800682
ACTA2 ; FAS
0.637 0.440 10 88990206 non coding transcript exon variant A/G snv 0.54 32
rs1501299
ADIPOQ ; ADIPOQ-AS1
0.597 0.720 3 186853334 intron variant G/C;T snv 52
rs2070600
AGER
0.561 0.760 6 32183666 missense variant C/T snv 5.3E-02 3.6E-02 82
rs1800625
AGER ; PBX2
0.641 0.680 6 32184665 upstream gene variant A/G snv 0.15 39
rs548234
ATG5
0.763 0.360 6 106120159 intron variant C/T snv 0.76 11
rs6568431
ATG5
0.790 0.320 6 106140931 intron variant A/C snv 0.61 7
rs62514004
CCN4
0.790 0.240 8 133190246 upstream gene variant A/G snv 0.28 8
rs4950928
CHI3L1
0.653 0.560 1 203186754 upstream gene variant G/A;C;T snv 33
rs7499
COL18A1 ; SLC19A1
0.925 0.200 21 45512414 3 prime UTR variant G/A snv 0.42 0.41 2
rs231775
CTLA4
0.504 0.720 2 203867991 missense variant A/G;T snv 0.42; 4.0E-06 115
rs3087243
CTLA4
0.623 0.720 2 203874196 downstream gene variant G/A snv 0.37 44
rs1801394
FASTKD3 ; MTRR
0.531 0.840 5 7870860 missense variant A/G snv 0.47 0.45 101
rs2282679
GC
0.645 0.480 4 71742666 intron variant T/G snv 0.21 38
rs3077
HLA-DPA1
0.701 0.440 6 33065245 3 prime UTR variant A/G snv 0.29 16
rs9277535
HLA-DPB1
0.724 0.440 6 33087084 3 prime UTR variant A/G snv 0.25 13
rs2040406
HLA-DQA1
0.882 0.240 6 32635230 intron variant A/G snv 0.23 3