DisGeNET - a database of gene-disease associations

List of associated variants

Rheumatoid Arthritis, C0003873

Source: ALL

Results per page

Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1035142	FLACC1	0.807	0.200	2	201288355	3 prime UTR variant	T/C;G	snv		0.54	7
rs1036199	HAVCR2	0.925	0.160	5	157104725	missense variant	C/A	snv	0.87	0.83	3
rs1041885	HLA-DRA	1.000	0.120	6	32445032	3 prime UTR variant	T/A	snv		0.15	1
rs1042127	CDSN ; PSORS1C1	0.925	0.120	6	31116393	missense variant	A/C	snv	0.21	0.17	2
rs1042337	HLA-DMB	1.000	0.120	6	32937204	missense variant	G/A	snv	0.78	0.80	1
rs1042448	HLA-DPB1	1.000	0.120	6	33086565	3 prime UTR variant	T/A;C	snv	6.1E-03; 7.4E-06		1
rs1042522	TP53	0.426	0.800	17	7676154	missense variant	G/C;T	snv	0.67		242
rs1042544	HLA-DPB1	0.925	0.200	6	33086680	3 prime UTR variant	A/G	snv		0.38	2
rs1042663	C2 ; CYP21A2 ; C2-AS1	0.925	0.160	6	31937353	synonymous variant	G/A	snv	9.7E-02	0.12	3
rs1043099	CASTOR1	1.000	0.120	22	30285268	3 prime UTR variant	C/A;G;T	snv			1
rs1045642	ABCB1	0.456	0.840	7	87509329	synonymous variant	A/G;T	snv	0.50		214
rs1046080	PRRC2A	1.000	0.120	6	31628105	missense variant	C/A	snv	0.79	0.74	2
rs10461703	ADAMTS12	1.000	0.120	5	33596119	intron variant	C/G;T	snv			1
rs10468473		1.000	0.120	17	12224359	intergenic variant	T/C	snv		8.8E-02	1
rs10484544	LOC105375002	1.000	0.120	6	29027942	upstream gene variant	T/C	snv		0.22	1
rs10484554	LOC112267902 ; HLA-B	0.807	0.200	6	31306778	intron variant	C/T	snv		0.12	11
rs10484560	TSBP1-AS1 ; TSBP1	1.000	0.120	6	32330360	intron variant	G/A	snv		8.6E-02	1
rs10484565	TAP2	0.925	0.200	6	32827255	3 prime UTR variant	G/A	snv		6.1E-02	2
rs10484566	PSMB9	0.925	0.200	6	32867481	regulatory region variant	T/G	snv		6.8E-02	2
rs10488631	TNPO3	0.742	0.280	7	128954129	upstream gene variant	T/C	snv		9.0E-02	13
rs104895218	TNFRSF1A	0.827	0.240	12	6334099	missense variant	C/T	snv			5
rs104895219	TNFRSF1A	0.827	0.240	12	6333823	missense variant	G/A;T	snv			5
rs104895221	TNFRSF1A	0.925	0.200	12	6333490	missense variant	A/G	snv			2
rs104895271	TNFRSF1A	0.851	0.240	12	6334161	missense variant	A/C;G	snv	1.6E-04; 4.8E-05		6
rs10489629	IL23R ; C1orf141	0.827	0.240	1	67222666	intron variant	T/C	snv		0.48	5