Disease: Lupus Erythematosus, Systemic
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs9267531
LY6G5B ; CSNK2B
0.882 0.120 6 31668965 non coding transcript exon variant A/G snv 7.5E-02 3
rs9275428 0.925 0.120 6 32703201 downstream gene variant A/C;G snv 2
rs9603612
COG6
0.925 0.120 13 39760715 intron variant C/G snv 0.30 2
rs10954214
IRF5
0.851 0.160 7 128949579 3 prime UTR variant C/T snv 0.64 4
rs11085725
TYK2
0.851 0.160 19 10351837 intron variant C/T snv 0.24 4
rs112846137 0.851 0.160 3 160595133 intergenic variant G/T snv 5.3E-02 4
rs1217393
AP4B1-AS1
0.851 0.160 1 113891324 intron variant G/A snv 0.42 4
rs13101828
DGKQ
0.851 0.160 4 971932 intron variant A/G snv 0.43 6
rs13389408
STAT4
0.851 0.160 2 191068557 3 prime UTR variant T/C snv 7.4E-02 4
rs193107685 0.851 0.160 7 74123572 downstream gene variant T/C snv 1.0E-02 4
rs2242665
CYP21A2 ; SLC44A4
0.882 0.160 6 31871532 missense variant C/T snv 0.60 0.60 3
rs2248932
BLK
0.882 0.160 8 11534141 intron variant A/G snv 0.60 3
rs2422345
LOC100506023 ; TNFSF4
0.851 0.160 1 173368608 upstream gene variant G/A snv 0.63 4
rs3130320
TSBP1-AS1
0.851 0.160 6 32255481 intron variant T/C snv 0.68 5
rs35018800
TYK2
0.790 0.160 19 10354167 missense variant G/A snv 4.6E-03 4.9E-03 9
rs35677470
DNASE1L3
0.807 0.160 3 58197909 missense variant G/A;C snv 4.8E-02; 4.0E-06 6
rs35929052 0.827 0.160 16 85960878 downstream gene variant C/G;T snv 5
rs4085613 0.827 0.160 1 152577542 downstream gene variant T/G snv 0.59 5
rs437179
SKIV2L ; CYP21A2
0.882 0.160 6 31961237 missense variant A/C snv 0.76 0.78 3
rs4958880
TNIP1
0.851 0.160 5 151058916 intron variant C/A;G snv 4
rs5029937
TNFAIP3
0.882 0.160 6 137874014 intron variant G/T snv 0.13 4
rs535586
EHMT2 ; CYP21A2
0.882 0.160 6 31892560 splice region variant T/A;C snv 0.77 3
rs5754467
CCDC116 ; YDJC
0.851 0.160 22 21630805 upstream gene variant A/G;T snv 4
rs58721818 0.851 0.160 6 137922602 regulatory region variant C/G;T snv 4
rs644827
SLC44A4 ; CYP21A2
0.882 0.160 6 31870664 missense variant T/C snv 0.60 0.60 3