DisGeNET - a database of gene-disease associations

List of shared variants

Rheumatoid Arthritis, C0003873

Disease: Atherosclerosis

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs662	PON1	0.485	0.840	7	95308134	missense variant	T/C	snv	0.38	0.42	157
rs854560	PON1	0.513	0.800	7	95316772	missense variant	A/C;G;N;T	snv	0.29		113
rs17611	C5	0.732	0.480	9	121006922	missense variant	C/T	snv	0.47	0.36	14
rs3939286		0.776	0.360	9	6210099	regulatory region variant	T/A;C	snv			12
rs4986790	TLR4	0.438	0.800	9	117713024	missense variant	A/G;T	snv	6.1E-02; 4.0E-06		223
rs4986791	TLR4	0.456	0.840	9	117713324	missense variant	C/T	snv	5.7E-02	4.9E-02	182
rs501120		0.763	0.240	10	44258419	downstream gene variant	T/C	snv		0.24	10
rs72661131	MBL2	0.742	0.480	10	52771739	upstream gene variant	A/G	snv		7.6E-04	15
rs7903146	TCF7L2	0.554	0.680	10	112998590	intron variant	C/G;T	snv			93
rs63750953	HBB	0.790	0.400	11	5227097	5 prime UTR variant	TT/-	delins		7.0E-06	10
rs5443	CDCA3 ; GNB3	0.532	0.760	12	6845711	synonymous variant	C/T	snv	0.36	0.44	106
rs549591993	F7	0.776	0.400	13	113105794	5 prime UTR variant	C/A	snv	4.0E-04	2.8E-05	12
rs1256049	ESR2	0.645	0.560	14	64257333	synonymous variant	C/T	snv	6.7E-02	6.3E-02	32
rs1378942	CSK	0.790	0.240	15	74785026	intron variant	C/A;T	snv			16
rs17228212	SMAD3	0.807	0.160	15	67166301	intron variant	T/C	snv		0.21	8
rs17231520	CETP	0.851	0.240	16	56961915	upstream gene variant	G/A	snv		2.1E-02	9
rs569033466	CETP	0.882	0.160	16	56961929	5 prime UTR variant	G/A;C;T	snv	4.8E-05; 2.4E-05		6
rs112735431	RNF213 ; RNF213-AS1	0.683	0.320	17	80385145	missense variant	G/A;C	snv	2.6E-04; 8.0E-06		24
rs12953	PECAM1	0.763	0.200	17	64356203	missense variant	C/A;T	snv		0.38	9
rs1862513	RETN	0.763	0.360	19	7668907	upstream gene variant	C/G;T	snv			11
rs2043211	CARD8	0.653	0.480	19	48234449	missense variant	A/T	snv	0.33	0.29	29
rs5498	ICAM4 ; ICAM1	0.531	0.760	19	10285007	missense variant	A/G	snv	0.44	0.37	99
rs563558831	CYP2B6	0.776	0.320	19	40991226	upstream gene variant	T/C	snv		7.0E-06	11
rs1535045	CD40	0.742	0.360	20	46119460	intron variant	C/A;G;T	snv			12
rs1883832	CD40	0.581	0.680	20	46118343	5 prime UTR variant	T/C	snv	0.75	0.80	52