Disease: Carcinoma of lung
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1042711
ADRB2
0.827 0.120 5 148826785 5 prime UTR variant C/A;G;T snv 4.2E-06; 0.68 5
rs1544410
VDR
0.542 0.760 12 47846052 intron variant C/A;G;T snv 78
rs17577
SLC12A5-AS1 ; MMP9
0.649 0.520 20 46014472 missense variant G/A;C snv 0.16 31
rs1800470
TGFB1
0.515 0.840 19 41353016 missense variant G/A;C snv 0.55; 2.4E-04 107
rs1800624
PBX2 ; AGER
0.658 0.480 6 32184610 upstream gene variant A/G;T snv 33
rs1982073
TGFB1
0.649 0.640 19 41353016 missense variant G/A;C snv 32
rs2227284
IL4
0.732 0.480 5 132677033 intron variant T/C;G snv 12
rs2228570
VDR
0.521 0.760 12 47879112 start lost A/C;G;T snv 0.63 99
rs2234922
EPHX1
0.630 0.440 1 225838705 missense variant A/G;T snv 0.19; 2.8E-05 42
rs2241766
ADIPOQ ; ADIPOQ-AS1
0.608 0.720 3 186853103 synonymous variant T/C;G snv 8.0E-06; 0.13 48
rs2292832
MIR149 ; GPC1 ; LOC100130449
0.605 0.640 2 240456086 non coding transcript exon variant T/A;C snv 0.59 46
rs3021097
IL10 ; IL19
0.752 0.440 1 206773289 5 prime UTR variant A/G snv 10
rs4588
GC
0.597 0.720 4 71752606 missense variant G/A;T snv 1.6E-05; 0.25 53
rs4673
CYBA
0.653 0.600 16 88646828 missense variant A/G;T snv 0.70 32
rs4986790
TLR4
0.438 0.800 9 117713024 missense variant A/G;T snv 6.1E-02; 4.0E-06 223
rs568404 0.851 0.120 10 129233875 regulatory region variant C/A;G;T snv 4
rs7041
GC
0.576 0.800 4 71752617 missense variant A/C;T snv 0.52; 4.0E-06 64
rs770460061
GSTP1
0.742 0.240 11 67585239 missense variant T/C;G snv 4.0E-06; 1.2E-05 14
rs1202989817
SOD1 ; LOC102724449
0.716 0.360 21 31659813 missense variant T/C;G snv 8.0E-06 7.0E-06 18
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs1416580204
MOK
0.608 0.720 14 102250837 missense variant C/T snv 4.0E-06 7.0E-06 49
rs1258159645
NQO1
0.630 0.600 16 69711128 missense variant G/A snv 7.0E-06 37
rs758244932
EPHX1
0.827 0.120 1 225828842 missense variant C/T snv 1.3E-04 1.0E-04 5
rs2066847
NOD2
0.716 0.400 16 50729868 frameshift variant C/-;CC delins 1.5E-02 18
rs2070600
AGER
0.561 0.760 6 32183666 missense variant C/T snv 5.3E-02 3.6E-02 82