DisGeNET - a database of gene-disease associations

List of shared variants

Atherosclerosis, C0004153

Disease: Coronary Artery Disease

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs2227631	SERPINE1	0.742	0.200	7	101126257	upstream gene variant	A/G	snv		0.54	13
rs1799889	SERPINE1	0.649	0.600	7	101126430	upstream gene variant	A/G	snv			31
rs3736234	OLR1	0.851	0.040	12	10160535	non coding transcript exon variant	G/A	snv		0.40	4
rs5498	ICAM4 ; ICAM1	0.531	0.760	19	10285007	missense variant	A/G	snv	0.44	0.37	99
rs974819		0.807	0.080	11	103789839	intron variant	T/A;C	snv			6
rs2066714	ABCA1	0.742	0.240	9	104824472	missense variant	T/C	snv	0.21	0.25	13
rs4149313	ABCA1	0.763	0.240	9	104824472	missense variant	T/C	snv			9
rs2066715	ABCA1	0.807	0.160	9	104825752	missense variant	C/T	snv	8.2E-02	5.5E-02	7
rs2230806	ABCA1	0.689	0.280	9	104858586	missense variant	C/T	snv	0.32	0.39	24
rs3900940	MYH15	0.827	0.040	3	108428881	missense variant	T/A;C	snv	4.3E-06; 0.24		6
rs646776	CELSR2	0.752	0.240	1	109275908	downstream gene variant	C/T	snv		0.74	25
rs599839	PSRC1	0.724	0.360	1	109279544	downstream gene variant	G/A;C	snv			27
rs4773144	COL4A1 ; COL4A2	0.827	0.080	13	110308365	intron variant	A/G	snv		0.42	7
rs1122608	SMARCA4	0.763	0.120	19	11052925	intron variant	G/T	snv		0.18	16
rs6511720	LDLR	0.790	0.120	19	11091630	intron variant	G/T	snv		0.12	15
rs671	ALDH2	0.529	0.840	12	111803962	missense variant	G/A	snv	1.9E-02	5.8E-03	116
rs7903146	TCF7L2	0.554	0.680	10	112998590	intron variant	C/G;T	snv			93
rs12347433	DELEC1 ; TNC	0.882	0.040	9	115035318	synonymous variant	T/C	snv	0.23	0.21	3
rs2075291	APOA5 ; ZPR1	0.752	0.400	11	116790676	missense variant	C/A;T	snv	6.4E-03; 4.0E-06		15
rs3135506	APOA5	0.708	0.400	11	116791691	missense variant	G/A;C	snv	3.0E-05; 6.8E-02		26
rs662799	APOA5	0.689	0.480	11	116792991	upstream gene variant	G/A	snv		0.90	33
rs1264352930	APOA1 ; APOA1-AS	0.807	0.120	11	116836082	missense variant	C/A	snv	4.2E-06		6
rs1384889210	APOA1 ; APOA1-AS	0.827	0.040	11	116836193	missense variant	C/A	snv			5
rs4986790	TLR4	0.438	0.800	9	117713024	missense variant	A/G;T	snv	6.1E-02; 4.0E-06		223
rs4986791	TLR4	0.456	0.840	9	117713324	missense variant	C/T	snv	5.7E-02	4.9E-02	182