DisGeNET - a database of gene-disease associations

List of shared variants

Atherosclerosis, C0004153

Disease: Carotid Atherosclerosis

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs74577862	ADIPOQ	0.882	0.080	3	186843903	intron variant	G/A	snv		1.8E-02	3
rs877087	RYR3	0.882	0.080	15	33582074	intron variant	T/C;G	snv			4
rs7439293	PALLD	0.807	0.080	4	168756335	non coding transcript exon variant	G/A	snv		0.44	6
rs16933090	SOX6	0.790	0.160	11	16434247	5 prime UTR variant	C/T	snv		0.12	7
rs2228315	SELPLG	0.807	0.120	12	108624122	missense variant	C/T	snv	0.11	0.14	7
rs2229116	RYR3	0.827	0.080	15	33613209	missense variant	A/G	snv	0.23	0.21	9
rs879254850	MIR6886 ; LDLR	0.776	0.160	19	11113365	missense variant	A/G;T	snv	4.0E-06		9
rs20551	EP300	0.752	0.320	22	41152004	missense variant	A/G	snv	0.31	0.23	10
rs2277680	CXCL16	0.776	0.160	17	4735268	missense variant	G/A	snv	0.47	0.41	10
rs4754	SPP1	0.752	0.360	4	87981540	missense variant	T/A;C	snv	0.32		12
rs2066714	ABCA1	0.742	0.240	9	104824472	missense variant	T/C	snv	0.21	0.25	13
rs17611	C5	0.732	0.480	9	121006922	missense variant	C/T	snv	0.47	0.36	14
rs5355	C1orf112 ; SELE	0.742	0.240	1	169726729	missense variant	G/A	snv	4.5E-02	3.3E-02	14
rs2075291	APOA5 ; ZPR1	0.752	0.400	11	116790676	missense variant	C/A;T	snv	6.4E-03; 4.0E-06		15
rs2295490	TRIB3	0.724	0.320	20	388261	missense variant	A/G;T	snv	0.18; 4.0E-06		16
rs5182	AGTR1	0.742	0.160	3	148741608	synonymous variant	C/T	snv	0.49	0.41	16
rs1051931	PLA2G7	0.708	0.400	6	46705206	missense variant	A/G	snv	0.81	0.79	19
rs10757274	CDKN2B-AS1	0.701	0.320	9	22096056	intron variant	A/G	snv		0.41	22
rs4925	GSTO1	0.677	0.560	10	104263031	missense variant	C/A	snv	0.25	0.23	28
rs5882	CETP	0.649	0.400	16	56982180	missense variant	G/A;C	snv	0.62		35
rs16139	NPY ; LOC107986777	0.658	0.560	7	24285260	missense variant	T/A;C	snv	4.0E-06; 3.0E-02		36
rs1799883	FABP2	0.658	0.440	4	119320747	missense variant	T/A;C;G	snv	0.73		36
rs3732379	CX3CR1	0.637	0.680	3	39265765	missense variant	C/T	snv	0.22	0.22	38
rs10757278	CDKN2B-AS1	0.620	0.520	9	22124478	intron variant	A/G	snv		0.40	44
rs3732378	CX3CR1	0.620	0.720	3	39265671	missense variant	G/A	snv	0.14	0.12	48