Disease: Hepatitis C
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs25487
XRCC1
0.441 0.800 19 43551574 missense variant T/C snv 0.68 0.71 205
rs1799782
XRCC1
0.474 0.800 19 43553422 missense variant G/A snv 9.5E-02 7.0E-02 151
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 121
rs231775
CTLA4
0.504 0.720 2 203867991 missense variant A/G;T snv 0.42; 4.0E-06 115
rs1544410
VDR
0.542 0.760 12 47846052 intron variant C/A;G;T snv 78
rs3212227
IL12B
0.566 0.840 5 159315942 3 prime UTR variant T/G snv 0.26 65
rs7574865
STAT4
0.574 0.720 2 191099907 intron variant T/G snv 0.79 59
rs28362491
LOC105377621 ; NFKB1
0.592 0.720 4 102500998 non coding transcript exon variant ATTG/- delins 56
rs1883832
CD40
0.581 0.680 20 46118343 5 prime UTR variant T/C snv 0.75 0.80 52
rs3775291
TLR3
0.602 0.640 4 186082920 missense variant C/G;T snv 1.2E-04; 0.28 51
rs11209026
IL23R
0.597 0.680 1 67240275 missense variant G/A snv 4.2E-02 4.6E-02 46
rs3087243
CTLA4
0.623 0.720 2 203874196 downstream gene variant G/A snv 0.37 44
rs187084
TLR9
0.641 0.480 3 52227015 intron variant A/G snv 0.38 36
rs1990760
IFIH1
0.672 0.480 2 162267541 missense variant C/T snv 0.50 0.45 33
rs10735810
VDR
0.662 0.640 12 47879112 start lost A/C;G;T snv 26
rs12785878
NADSYN1
0.677 0.520 11 71456403 intron variant G/A;T snv 25
rs6897932
IL7R
0.683 0.560 5 35874473 missense variant C/T snv 0.23 0.21 25
rs13266634
SLC30A8 ; LOC105375716
0.724 0.480 8 117172544 missense variant C/A;T snv 0.29 23
rs696
NFKBIA
0.708 0.520 14 35401887 3 prime UTR variant C/T snv 0.45 22
rs9264942
LOC112267902 ; HLA-B
0.763 0.400 6 31306603 intron variant T/C snv 0.34 15
rs179008
TLR7
0.763 0.360 X 12885540 missense variant A/C;T snv 0.18 0.18 14
rs878859113
CD24
0.763 0.360 6 106971734 missense variant G/A snv 0.35 11
rs1475539937
TLR9
0.882 0.120 3 52223085 missense variant A/G snv 4.0E-06 5