Disease: Adenocarcinoma Of Esophagus
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs25487
XRCC1
0.441 0.800 19 43551574 missense variant T/C snv 0.68 0.71 205
rs1805087
MTR
0.496 0.800 1 236885200 missense variant A/G snv 0.20 0.21 135
rs13181
KLC3 ; ERCC2
0.487 0.760 19 45351661 stop gained T/A;G snv 4.0E-06; 0.32 134
rs759412116
ERCC2
0.581 0.640 19 45352210 missense variant C/G;T snv 4.0E-06; 6.0E-05 55
rs2297518
NOS2
0.658 0.480 17 27769571 missense variant G/A snv 0.18 0.17 30
rs3088440
CDKN2A ; CDKN2A-DT
0.776 0.240 9 21968160 3 prime UTR variant G/A snv 0.13 12
rs9257809
OR12D3 ; OR5V1
0.790 0.320 6 29388554 intron variant A/G snv 5.8E-02 10
rs2178146 0.827 0.080 16 86430089 downstream gene variant T/C snv 0.31 8
rs11789015
BARX1
0.882 0.080 9 93953746 intron variant A/C;G snv 6
rs2687201 0.925 0.080 3 70879779 intergenic variant A/C;G snv 6
rs3784262
ALDH1A2
0.882 0.160 15 57960908 intron variant T/A;C snv 6
rs10419226
CRTC1
0.925 0.080 19 18692362 intron variant T/G snv 0.67 5
rs4800353 0.925 0.080 18 22074176 intergenic variant A/G snv 0.30 5
rs7632500
LOC107986152
0.925 0.080 3 168007561 downstream gene variant A/G snv 0.17 5
rs11901649
APOB
0.882 0.080 2 21027351 intron variant G/A;C;T snv 3
rs4676893 0.882 0.080 3 70868488 intergenic variant A/T snv 0.61 3
rs7255
GDF7
0.925 0.080 2 20679060 3 prime UTR variant T/A;C snv 3
rs10108511
LINC00208
0.925 0.080 8 11578007 non coding transcript exon variant T/A;C snv 2
rs1247942 0.925 0.080 12 114235918 downstream gene variant G/A;C snv 2
rs1263178238
VSIG10L
0.925 0.080 19 51338047 missense variant T/C snv 2.6E-05 4.9E-05 2
rs17451754
CFTR
0.925 0.080 7 117616658 intron variant G/A snv 0.10 2
rs17749155
MSRA
0.925 0.080 8 10210563 intron variant G/A snv 0.16 2
rs1979654 0.925 0.080 16 86363229 TF binding site variant G/C snv 0.55 2
rs199620551
CRTC1
0.925 0.080 19 18693485 intron variant G/- del 9.2E-02 2
rs2464469
LOC283665 ; ALDH1A2
0.925 0.080 15 58069827 intron variant G/A snv 0.65 2