Disease: Malignant neoplasm of colon and/or rectum
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2735971
MRPL23 ; H19
0.790 0.240 11 2000419 intron variant T/C snv 7
rs8679
PARP1
0.790 0.200 1 226360853 3 prime UTR variant A/G snv 0.16 7
rs13278062
LOC389641 ; TNFRSF10A
0.807 0.200 8 23225458 non coding transcript exon variant G/A;C;T snv 8
rs11685387
XRCC5
0.776 0.240 2 216109091 splice region variant C/T snv 0.30 9
rs7727691
XRCC4 ; TMEM167A
0.763 0.200 5 83075876 intron variant C/T snv 0.32 9
rs9288518
XRCC5
0.776 0.240 2 216196997 intron variant A/G snv 0.35 9
rs3757441
EZH2
0.752 0.200 7 148827660 intron variant C/T snv 0.80 12
rs2075686
TMEM167A ; XRCC4
0.742 0.240 5 83076927 intron variant C/T snv 1.7E-02 13
rs1800371
TP53
0.742 0.240 17 7676230 missense variant G/A;T snv 1.2E-03 15
rs28360317
XRCC4
0.716 0.280 5 83323739 intron variant -/CCT delins 0.24 15
rs2306283
SLCO1B1
0.742 0.320 12 21176804 missense variant A/G;T snv 0.47 16
rs7439366
UGT2B7
0.752 0.320 4 69098620 missense variant T/C snv 0.56 0.57 16
rs28360071
XRCC4
0.708 0.240 5 83142293 intron variant GATGAGGAAACTAACTCTCAGTGGTGTTTA/- delins 0.48 18
rs3734091
XRCC4
0.689 0.280 5 83204915 missense variant G/T snv 2.3E-02 1.4E-02 19
rs2031920
LOC107984284 ; CYP2E1
0.695 0.240 10 133526341 non coding transcript exon variant C/T snv 3.1E-02 20
rs2295080
MTOR
0.695 0.320 1 11262571 upstream gene variant G/C;T snv 20
rs2854744
IGFBP3
0.695 0.520 7 45921476 intron variant G/T snv 0.48 20
rs9904341
BIRC5
0.695 0.280 17 78214286 5 prime UTR variant G/A;C;T snv 0.38; 4.8E-06 20
rs762551
CYP1A2
0.701 0.400 15 74749576 intron variant C/A snv 0.67 23
rs1056827
CYP1B1 ; CYP1B1-AS1
0.683 0.400 2 38075034 missense variant C/A snv 0.32 0.35 24
rs138213197
HOXB13
0.701 0.240 17 48728343 missense variant C/T snv 1.8E-03 1.6E-03 24
rs156697
GSTO2
0.672 0.560 10 104279427 missense variant A/G;T snv 0.35 25
rs2839698
MRPL23 ; MIR675 ; H19
0.662 0.520 11 1997623 non coding transcript exon variant G/A snv 0.41 25
rs1042028
SULT1A1
0.658 0.440 16 28606193 missense variant C/T snv 0.22 0.30 30
rs9282861
SULT1A1
0.658 0.440 16 28606193 missense variant C/T snv 31