Disease: Secondary malignant neoplasm of lymph node
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10754339
VTCN1
0.882 0.120 1 117147650 3 prime UTR variant G/A snv 0.88 0.76 3
rs1256054
ESR2
0.882 0.120 14 64249595 synonymous variant G/C snv 2.8E-03 9.6E-04 3
rs1455751791
ESR1
0.882 0.120 6 152011735 synonymous variant C/G snv 4.0E-06 3
rs17530068
LOC105377871
0.882 0.120 6 81483392 intergenic variant T/C snv 0.19 3
rs3760468
NME1-NME2 ; NME1
0.882 0.120 17 51153130 upstream gene variant A/T snv 0.39 3
rs3801004
FSCN1
0.882 0.120 7 5598591 intron variant C/A;G;T snv 3
rs6990097
TNKS
0.882 0.120 8 9555347 non coding transcript exon variant T/C snv 0.28 3
rs2105269
GALNT16
0.882 0.120 14 69280517 intron variant A/G snv 0.35 4
rs3218038
CCNE1
0.882 0.120 19 29814988 intron variant G/T snv 9.1E-02 4
rs438034
CENPF
0.882 0.120 1 214657274 stop gained A/G;T snv 0.61 4
rs6762208
SENP2
0.851 0.200 3 185613377 missense variant C/A;T snv 0.36; 1.2E-05 4
rs2881766
ESR1
0.882 0.120 6 151797984 intron variant T/G snv 0.35 5
rs2228468
ACKR2 ; KRBOX1 ; CYP8B1
0.882 0.120 3 42865620 missense variant A/C;T snv 0.43; 8.3E-03 6
rs10053538
HAVCR2
0.807 0.160 5 157110499 intron variant C/A;T snv 7
rs6024836
FAM210B ; AURKA
0.851 0.160 20 56369012 downstream gene variant G/A snv 0.42 7
rs7963551
RAD52
0.807 0.160 12 912349 3 prime UTR variant T/G snv 0.13 7
rs4784227
CASC16
0.807 0.160 16 52565276 intron variant C/T snv 0.20 8
rs746429
SIPA1
0.882 0.120 11 65649963 synonymous variant G/A snv 0.31 0.30 8
rs11730582
SPP1
0.807 0.240 4 87975269 non coding transcript exon variant T/C snv 0.37 10
rs3020449
ESR2
0.807 0.200 14 64306674 intron variant A/G;T snv 10
rs3741219
MRPL23 ; H19 ; HOTS
0.776 0.280 11 1995389 non coding transcript exon variant A/G snv 0.42 10
rs11225395
MMP8
0.776 0.360 11 102725749 intron variant A/C;G snv 11
rs13293512 0.763 0.360 9 94167461 intron variant T/C snv 0.24 11
rs16949649
NME1 ; NME1-NME2
0.776 0.200 17 51152947 upstream gene variant T/C snv 0.39 12
rs931127
SIPA1 ; PCNX3
0.790 0.160 11 65637829 upstream gene variant G/A snv 0.49 12