DisGeNET - a database of gene-disease associations

List of shared variants

Malignant Neoplasms, C0006826

Disease: Colorectal Carcinoma

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs2075686	TMEM167A ; XRCC4	0.742	0.240	5	83076927	intron variant	C/T	snv		1.7E-02	13
rs2094258	ERCC5 ; BIVM-ERCC5	0.701	0.280	13	102844409	intron variant	C/T	snv		0.18	20
rs2234767	FAS ; ACTA2	0.649	0.280	10	88989499	intron variant	G/A;T	snv	0.15		30
rs2243115	IL12A-AS1 ; IL12A	0.776	0.320	3	159988493	intron variant	T/G	snv		0.10	12
rs2267437	DESI1 ; XRCC6	0.724	0.320	22	41620695	intron variant	C/A;G	snv			19
rs2279744	MDM2	0.605	0.640	12	68808800	intron variant	T/G	snv		0.31	48
rs2282679	GC	0.645	0.480	4	71742666	intron variant	T/G	snv		0.21	38
rs2424913	DNMT3B	0.708	0.440	20	32786453	intron variant	C/T	snv	0.56	0.53	18
rs2470151	MIR7973-2 ; CYP19A1	0.925	0.080	15	51314872	intron variant	C/T	snv		0.29	4
rs2585428	CYP24A1	0.763	0.200	20	54170358	intron variant	C/T	snv		0.46	11
rs2665802	GH1 ; CSHL1 ; LOC112268204	0.925	0.120	17	63917670	intron variant	A/G;T	snv		0.32	4
rs2699887	PIK3CA ; LOC101928739	0.763	0.280	3	179148620	intron variant	C/T	snv		0.18	11
rs2735970	H19 ; MRPL23	1.000	0.080	11	2000585	intron variant	T/C	snv			3
rs28360071	XRCC4	0.708	0.240	5	83142293	intron variant	GATGAGGAAACTAACTCTCAGTGGTGTTTA/-	delins		0.48	18
rs2854744	IGFBP3	0.695	0.520	7	45921476	intron variant	G/T	snv		0.48	20
rs3116496	CD28	0.776	0.160	2	203729789	intron variant	T/C	snv	0.15	0.14	11
rs3757441	EZH2	0.752	0.200	7	148827660	intron variant	C/T	snv		0.80	12
rs3761548	FOXP3	0.620	0.680	X	49261784	intron variant	G/A;T	snv			42
rs3782130	CYP27B1 ; METTL1	0.925	0.120	12	57768115	intron variant	G/A;C	snv		0.27	4
rs3789243	ABCB1	0.776	0.120	7	87591570	intron variant	A/G	snv		0.50	14
rs4464148	SMAD7	0.827	0.120	18	48932662	intron variant	T/C	snv		0.25	7
rs4778889	IL16	0.683	0.480	15	81296654	intron variant	T/C	snv		0.24	24
rs4791171	AXIN2	0.763	0.080	17	65545379	intron variant	T/C	snv		0.55	11
rs4809960	CYP24A1	0.807	0.240	20	54169534	intron variant	T/C	snv		0.20	8
rs4925386	LAMA5	0.776	0.080	20	62345988	intron variant	T/C	snv		0.56	14