Disease: Thyroid Neoplasm
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10069690
TERT
0.595 0.560 5 1279675 intron variant C/T snv 0.36 53
rs1031583860
GLYAT
0.882 0.080 11 58709815 missense variant T/C snv 3
rs1032006770
EGFR
0.882 0.080 7 55160171 missense variant A/G snv 4.0E-06 7.0E-06 3
rs1042522
TP53
0.426 0.800 17 7676154 missense variant G/C;T snv 0.67 242
rs104894228
LRRC56 ; HRAS
0.605 0.560 11 534286 missense variant C/A;G;T snv 48
rs1064795638
BAP1
0.851 0.080 3 52403251 stop gained G/A snv 7
rs10951937
SUN3
0.882 0.080 7 47992027 intron variant A/C snv 0.43 3
rs11077
POLR1C ; XPO5
0.732 0.320 6 43523209 3 prime UTR variant T/G snv 0.47 14
rs11214077
SDHD ; TIMM8B
0.752 0.120 11 112087953 missense variant A/G snv 6.6E-03 6.7E-03 12
rs113488022
BRAF
0.351 0.840 7 140753336 missense variant A/C;G;T snv 4.0E-06 490
rs1136201
ERBB2
0.645 0.280 17 39723335 missense variant A/G;T snv 0.20 34
rs1136410
PARP1
0.559 0.760 1 226367601 missense variant A/G snv 0.21 0.15 70
rs1143623
IL1B
0.677 0.440 2 112838252 upstream gene variant C/G snv 0.24 29
rs11554290
NRAS
0.583 0.600 1 114713908 missense variant T/A;C;G snv 59
rs11674595
IL1R2
0.763 0.200 2 101994530 intron variant T/C snv 0.22 13
rs116909374 0.776 0.120 14 36269155 regulatory region variant C/T snv 2.3E-02 11
rs1169803481
EGFR
0.807 0.160 7 55198851 missense variant A/G snv 4.0E-06 7
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs1248131654
RBMS1
0.851 0.080 2 160367217 missense variant G/A snv 1.4E-05 4
rs12508721
IL21-AS1
0.742 0.360 4 122623509 intron variant C/T snv 0.24 11
rs12628
LRRC56 ; HRAS
0.776 0.160 11 534242 synonymous variant A/G snv 0.32 0.34 10
rs12769288
MGMT
0.882 0.080 10 129488086 intron variant C/T snv 0.10 3
rs12785878
NADSYN1
0.677 0.520 11 71456403 intron variant G/A;T snv 25
rs1297812518
LOC112268131 ; KLC1 ; XRCC3
0.763 0.160 14 103707168 missense variant G/A snv 1.3E-05 1.4E-05 9
rs13143866
IL21 ; IL21-AS1
0.851 0.200 4 122619603 intron variant G/A snv 0.24 4