Disease: Malignant neoplasm of prostate
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1042522
TP53
0.426 0.800 17 7676154 missense variant G/C;T snv 0.67 242
rs1130409
APEX1
0.555 0.720 14 20456995 missense variant T/A;C;G snv 4.0E-06; 4.0E-06; 0.42 72
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 214
rs121434592
AKT1
0.595 0.640 14 104780214 missense variant C/T snv 4.0E-06 54
rs121913500
IDH1
0.529 0.600 2 208248388 missense variant C/A;G;T snv 4.0E-06 96
rs13181
KLC3 ; ERCC2
0.487 0.760 19 45351661 stop gained T/A;G snv 4.0E-06; 0.32 134
rs1353702185
MDM2
0.550 0.720 12 68839311 missense variant C/G snv 4.0E-06 79
rs1394960893
GSTP1
0.807 0.240 11 67586553 synonymous variant C/T snv 6
rs1544410
VDR
0.542 0.760 12 47846052 intron variant C/A;G;T snv 78
rs16917496
KMT5A
0.689 0.360 12 123409283 3 prime UTR variant C/G;T snv 21
rs1799793
ERCC2
0.557 0.640 19 45364001 missense variant C/A;T snv 7.1E-06; 0.29 72
rs1800440
CYP1B1
0.653 0.440 2 38070996 missense variant T/C;G snv 0.15; 4.0E-06 29
rs1800470
TGFB1
0.515 0.840 19 41353016 missense variant G/A;C snv 0.55; 2.4E-04 107
rs2231142
ABCG2
0.583 0.680 4 88131171 missense variant G/C;T snv 4.0E-06; 0.12 56
rs2241766
ADIPOQ ; ADIPOQ-AS1
0.608 0.720 3 186853103 synonymous variant T/C;G snv 8.0E-06; 0.13 48
rs2279115
BCL2
0.724 0.320 18 63319604 5 prime UTR variant G/A;T snv 18
rs2298881
ERCC1
0.653 0.400 19 45423658 intron variant C/A;T snv 25
rs231775
CTLA4
0.504 0.720 2 203867991 missense variant A/G;T snv 0.42; 4.0E-06 115
rs25489
XRCC1
0.550 0.720 19 43552260 missense variant C/G;T snv 8.5E-06; 7.1E-02 78
rs2645429
FDFT1 ; LOC105379243
0.790 0.120 8 11802542 non coding transcript exon variant A/G;T snv 7
rs3218536
XRCC2
0.620 0.440 7 152648922 missense variant C/G;T snv 4.0E-06; 6.4E-02 37
rs3761548
FOXP3
0.620 0.680 X 49261784 intron variant G/A;T snv 42
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv 306
rs4588
GC
0.597 0.720 4 71752606 missense variant G/A;T snv 1.6E-05; 0.25 53
rs5275
PTGS2
0.583 0.560 1 186673926 3 prime UTR variant A/G;T snv 55