Disease: Liver carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1048638
CA9
0.807 0.160 9 35681125 3 prime UTR variant C/A;G snv 10
rs10491121
LOC101927369 ; CCL4
0.882 0.120 17 36102943 upstream gene variant G/A snv 0.32 5
rs10817938
PTCSC2
0.882 0.080 9 97700127 non coding transcript exon variant T/C snv 3.2E-02 5
rs11134527
MIR218-2 ; SLIT3
0.677 0.400 5 168768351 intron variant G/A snv 0.25 24
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 214
rs12108497
PRIMPOL ; CASP3
0.851 0.080 4 184650403 intron variant C/G;T snv 6
rs121913273
PIK3CA
0.605 0.440 3 179218294 missense variant G/A;C snv 44
rs121913530
KRAS
0.583 0.640 12 25245351 missense variant C/A;G;T snv 63
rs1800625
AGER ; PBX2
0.641 0.680 6 32184665 upstream gene variant A/G snv 0.15 39
rs1800734
EPM2AIP1 ; MLH1
0.653 0.400 3 36993455 5 prime UTR variant G/A snv 0.22 30
rs187115
CD44
0.695 0.320 11 35154612 intron variant T/C snv 0.37 22
rs2031920
LOC107984284 ; CYP2E1
0.695 0.240 10 133526341 non coding transcript exon variant C/T snv 3.1E-02 20
rs2233678
PIN1 ; LOC100996288
0.732 0.360 19 9834503 non coding transcript exon variant G/A;C snv 14
rs2233679
PIN1 ; LOC100996288
0.763 0.360 19 9834678 splice region variant C/T snv 0.59 11
rs2279744
MDM2
0.605 0.640 12 68808800 intron variant T/G snv 0.31 48
rs2299939
PTEN
0.827 0.080 10 87897393 intron variant C/A;T snv 5
rs2736100
TERT
0.550 0.880 5 1286401 3 prime UTR variant C/A snv 0.52 83
rs361525
TNF
0.562 0.760 6 31575324 upstream gene variant G/A snv 4.6E-02 62
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv 306
rs401681
CLPTM1L
0.620 0.640 5 1321972 intron variant C/T snv 0.48 42
rs751402
ERCC5 ; BIVM-ERCC5
0.724 0.360 13 102845848 5 prime UTR variant A/G snv 0.76 15
rs833061
VEGFA
0.605 0.600 6 43769749 upstream gene variant C/G;T snv 42
rs878854066
TP53
0.439 0.800 17 7676153 missense variant GG/AC mnv 213
rs886039484
TP53
0.641 0.440 17 7674888 missense variant T/C;G snv 32
rs920778
HOTAIR
0.633 0.480 12 53966448 intron variant G/A snv 0.57 36