DisGeNET - a database of gene-disease associations

List of shared variants

Uterine Cervical Neoplasm, C0007873

Disease: Transitional cell carcinoma of bladder

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	Num. diseases
rs121913279	PIK3CA	0.526	0.560	3	179234297	missense variant	A/G;T	snv	4.0E-06; 4.0E-06	101
rs104894229	LRRC56 ; HRAS	0.564	0.600	11	534289	missense variant	C/A;G;T	snv		73
rs104894230	HRAS ; LRRC56	0.564	0.600	11	534288	missense variant	C/A;G;T	snv		73
rs104886003	PIK3CA	0.562	0.440	3	179218303	missense variant	G/A;C	snv	4.0E-06	71
rs104894228	LRRC56 ; HRAS	0.605	0.560	11	534286	missense variant	C/A;G;T	snv		48
rs121913273	PIK3CA	0.605	0.440	3	179218294	missense variant	G/A;C	snv		44
rs121913281	PIK3CA	0.623	0.520	3	179234296	missense variant	C/T	snv		37
rs121913274	PIK3CA	0.645	0.320	3	179218304	missense variant	A/C;G;T	snv		33
rs104894226	LRRC56 ; HRAS	0.658	0.560	11	534285	missense variant	C/A;G;T	snv		29
rs121912660	TP53	0.683	0.240	17	7673781	missense variant	C/A;G;T	snv		26
rs121913275	PIK3CA	0.672	0.320	3	179218305	missense variant	G/A;C;T	snv	4.0E-06	26
rs371769427	U2AF1	0.683	0.400	21	43104346	missense variant	G/A;T	snv	8.0E-06	24
rs121913286	PIK3CA	0.677	0.280	3	179218306	missense variant	C/A;G	snv		23
rs121913403	CTNNB1	0.683	0.240	3	41224622	missense variant	C/A;G;T	snv		23
rs1057519932	PIK3CA	0.683	0.320	3	179234298	missense variant	T/G	snv		22
rs1057519981	TP53	0.689	0.440	17	7674251	missense variant	A/C;G;T	snv		22
rs747342068	TP53	0.695	0.440	17	7675218	missense variant	T/C;G	snv	4.0E-06	21
rs730882005	TP53	0.701	0.400	17	7674250	missense variant	C/A;G;T	snv	8.0E-06	20
rs1057519927	PIK3CA	0.716	0.240	3	179218295	missense variant	A/C;G;T	snv		19
rs1057519996	TP53	0.701	0.360	17	7675217	splice acceptor variant	T/A;C;G	snv		19
rs753660142	TP53	0.708	0.280	17	7673782	missense variant	T/C;G	snv	1.6E-05	19
rs28931588	CTNNB1	0.701	0.200	3	41224606	missense variant	G/A;C;T	snv		17
rs866775781	TP53	0.716	0.440	17	7675216	splice acceptor variant	C/A;G	snv		17
rs397517201	PIK3CA	0.732	0.240	3	179218307	missense variant	A/C;G;T	snv		16
rs149680468	FBXW7	0.742	0.320	4	152326137	missense variant	G/A;C;T	snv		15