Disease: Ulcerative Colitis
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1045642
ABCB1
0.456 0.840 7 87509329 synonymous variant A/G;T snv 0.50 214
rs1800629
TNF
0.472 0.920 6 31575254 upstream gene variant G/A snv 0.12 0.14 169
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 121
rs231775
CTLA4
0.504 0.720 2 203867991 missense variant A/G;T snv 0.42; 4.0E-06 115
rs3184504
SH2B3 ; ATXN2
0.572 0.600 12 111446804 missense variant T/A;C;G snv 0.67 92
rs361525
TNF
0.562 0.760 6 31575324 upstream gene variant G/A snv 4.6E-02 62
rs7574865
STAT4
0.574 0.720 2 191099907 intron variant T/G snv 0.79 59
rs3087243
CTLA4
0.623 0.720 2 203874196 downstream gene variant G/A snv 0.37 44
rs2569190
CD14 ; TMCO6
0.620 0.560 5 140633331 intron variant A/G snv 0.57 39
rs12232497 0.701 0.360 17 39883866 intergenic variant T/C snv 0.35 18
rs4728142 0.732 0.320 7 128933913 upstream gene variant G/A snv 0.38 18
rs2304256
TYK2
0.732 0.360 19 10364976 missense variant C/A snv 0.27 0.23 13
rs767455
TNFRSF1A
0.742 0.400 12 6341779 synonymous variant T/C snv 0.37 0.40 13
rs11889341
STAT4
0.732 0.480 2 191079016 intron variant C/T snv 0.21 12
rs2872507 0.752 0.360 17 39884510 intergenic variant G/A;T snv 12
rs6478109
TNFSF15
0.752 0.320 9 114806486 upstream gene variant A/G snv 0.74 12
rs8067378 0.752 0.240 17 39895095 regulatory region variant A/G snv 0.50 12
rs2305480
GSDMB
0.763 0.280 17 39905943 missense variant G/A snv 0.40 0.35 10
rs6478108
TNFSF15
0.763 0.200 9 114796423 intron variant C/T snv 0.73 10
rs3807306
IRF5
0.776 0.320 7 128940626 intron variant G/A;T snv 8
rs1860545
TNFRSF1A
0.790 0.200 12 6337611 intron variant G/A snv 0.31 7
rs4979462
TNFSF15
0.790 0.240 9 114804733 intron variant C/T snv 0.13 7
rs16841904
DENND1B
0.807 0.160 1 197732862 intron variant C/T snv 0.18 6
rs35736272
ZPBP2
0.807 0.160 17 39876427 intron variant T/C snv 0.35 6
rs6974491
ELMO1
0.807 0.120 7 37334906 intron variant G/A snv 0.14 6