Disease: Psoriasis
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1800629
TNF
0.472 0.920 6 31575254 upstream gene variant G/A snv 0.12 0.14 169
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 121
rs1799971
OPRM1
0.559 0.600 6 154039662 missense variant A/G snv 0.19 0.12 95
rs3184504
SH2B3 ; ATXN2
0.572 0.600 12 111446804 missense variant T/A;C;G snv 0.67 92
rs731236
VDR
0.542 0.760 12 47844974 synonymous variant A/G snv 0.33 0.34 81
rs361525
TNF
0.562 0.760 6 31575324 upstream gene variant G/A snv 4.6E-02 62
rs7574865
STAT4
0.574 0.720 2 191099907 intron variant T/G snv 0.79 59
rs7975232
VDR
0.576 0.760 12 47845054 intron variant C/A snv 0.51 0.55 56
rs34536443
TYK2
0.667 0.400 19 10352442 missense variant G/C snv 2.7E-02 2.8E-02 25
rs12232497 0.701 0.360 17 39883866 intergenic variant T/C snv 0.35 18
rs4728142 0.732 0.320 7 128933913 upstream gene variant G/A snv 0.38 18
rs11065979 0.851 0.200 12 111621753 intergenic variant C/T snv 0.30 12
rs6478109
TNFSF15
0.752 0.320 9 114806486 upstream gene variant A/G snv 0.74 12
rs6478108
TNFSF15
0.763 0.200 9 114796423 intron variant C/T snv 0.73 10
rs694739
LOC102723878
0.763 0.320 11 64329761 upstream gene variant A/G snv 0.28 9
rs1860545
TNFRSF1A
0.790 0.200 12 6337611 intron variant G/A snv 0.31 7
rs16841904
DENND1B
0.807 0.160 1 197732862 intron variant C/T snv 0.18 6
rs35736272
ZPBP2
0.807 0.160 17 39876427 intron variant T/C snv 0.35 6
rs7665090
MANBA
0.807 0.280 4 102630446 downstream gene variant A/G snv 0.55 6
rs10852936
ZPBP2
0.925 0.120 17 39875461 intron variant C/T snv 0.39 0.40 3
rs2546890
LOC285626
0.882 0.200 5 159332892 non coding transcript exon variant A/G snv 0.52 3
rs4780355
SOCS1 ; RMI2 ; LOC105371082
0.882 0.120 16 11254001 intron variant T/C;G snv 3