Disease: Oral cleft
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs642961 0.732 0.440 1 209815925 intergenic variant A/G snv 0.84 14
rs2235371
IRF6
0.752 0.360 1 209790735 missense variant C/T snv 8.7E-02 3.9E-02 11
rs12543318 0.882 0.120 8 87856112 intergenic variant C/A snv 0.68 4
rs6072081
LOC102724968
0.851 0.120 20 40632414 intergenic variant A/G snv 0.49 4
rs10886040
SHTN1
0.882 0.120 10 117086783 intron variant C/G snv 0.20 3
rs11841646 0.882 0.120 13 80105167 intergenic variant T/A;G snv 0.42 3
rs12944377
NTN1
0.882 0.120 17 9044391 intron variant T/C snv 0.36 3
rs6029258 0.882 0.120 20 40656135 intergenic variant G/A snv 0.58 3
rs66515264
ABCA4
0.882 0.120 1 94092554 intron variant G/A;T snv 3
rs72728734
CCDC26
0.882 0.120 8 128921474 intron variant A/G snv 0.13 3
rs7566780 0.882 0.120 2 16548089 intron variant A/C;G snv 3
rs76479869
TP63
0.882 0.120 3 189835583 intron variant C/T snv 4.3E-02 3
rs9439713
PAX7
0.882 0.120 1 18646282 intron variant G/A snv 0.31 3
rs9439714
PAX7
0.882 0.120 1 18649995 intron variant T/C snv 0.28 3
rs3789432
ABCA4
0.925 0.080 1 94109752 intron variant T/C snv 0.33 2