Disease: Malignant neoplasm of prostate
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10090154 0.807 0.160 8 127519892 intergenic variant T/A;C snv 7
rs10165970
NPAS2
0.708 0.320 2 100840527 intron variant G/A snv 0.16 18
rs10505477
CASC8 ; PCAT1 ; POU5F1B
0.658 0.400 8 127395198 intron variant A/G snv 0.40 31
rs10519097
RORA
0.708 0.320 15 60997989 intron variant C/T snv 0.13 18
rs1056836
CYP1B1
0.581 0.680 2 38071060 missense variant G/C snv 0.51 58
rs10759932
TLR4
0.732 0.560 9 117702866 upstream gene variant T/C snv 0.18 15
rs1131445
IL16 ; STARD5
0.724 0.440 15 81309441 3 prime UTR variant T/A;C snv 16
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 214
rs1143627
IL1B
0.605 0.760 2 112836810 5 prime UTR variant G/A snv 0.56 47
rs11536891
TLR4
0.851 0.120 9 117717059 3 prime UTR variant T/C snv 0.16 4
rs11574143
VDR
0.827 0.200 12 47841134 downstream gene variant C/T snv 0.11 5
rs11943456
TMEM165
0.708 0.320 4 55410167 intron variant T/C snv 0.42 18
rs121913286
PIK3CA
0.677 0.280 3 179218306 missense variant C/A;G snv 23
rs12255372
TCF7L2
0.667 0.480 10 113049143 intron variant G/A;T snv 28
rs1258159645
NQO1
0.630 0.600 16 69711128 missense variant G/A snv 7.0E-06 37
rs12976445
SPACA6 ; SPACA6P-AS ; MIRLET7E ; MIR125A
0.689 0.600 19 51693200 non coding transcript exon variant T/C snv 0.45 20
rs13252298
PCAT2 ; PCAT1 ; PRNCR1 ; CASC19
0.827 0.160 8 127082911 non coding transcript exon variant A/G snv 0.24 8
rs14133
HSPB2-C11orf52 ; CRYAB ; HSPB2
0.807 0.200 11 111911973 5 prime UTR variant G/C snv 0.27 7
rs1447295
CASC8
0.658 0.400 8 127472793 intron variant A/C;T snv 29
rs145204276
ZBTB37 ; SNORD74 ; SNORD75 ; GAS5 ; SNORD77 ; SNORA103 ; SNORD76
0.658 0.320 1 173868254 splice donor variant CAAGG/- delins 8.8E-02 31
rs1456315
PRNCR1 ; PCAT1 ; CASC19
0.790 0.200 8 127091692 non coding transcript exon variant T/A;C snv 9
rs1463038513
APC
0.658 0.440 5 112839511 frameshift variant TAAA/- delins 36
rs1501299
ADIPOQ ; ADIPOQ-AS1
0.597 0.720 3 186853334 intron variant G/C;T snv 52
rs16260
CDH1
0.716 0.440 16 68737131 upstream gene variant C/A snv 0.24 19
rs16917496
KMT5A
0.689 0.360 12 123409283 3 prime UTR variant C/G;T snv 21