Disease: Adenocarcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1989969
VDR
0.827 0.120 12 47884227 intron variant A/C;G;T snv 0.60 8
rs373129709
LOC105375284 ; EGFR
0.827 0.120 7 55019338 missense variant G/A;T snv 1.1E-04 7
rs16906252
MGMT
0.732 0.200 10 129467281 synonymous variant C/T snv 5.5E-02 5.1E-02 19
rs4072037
MUC1
0.732 0.240 1 155192276 splice acceptor variant C/A;T snv 0.59 22
rs397517132
EGFR
0.623 0.280 7 55191846 missense variant A/T snv 48
rs876658657
MLH1
0.677 0.280 3 37020356 missense variant A/G snv 4.0E-06 25
rs2294008
PSCA ; JRK
0.672 0.320 8 142680513 5 prime UTR variant C/T snv 0.46 0.45 28
rs2853669
TERT
0.649 0.320 5 1295234 upstream gene variant A/G snv 0.25 35
rs3765524
PLCE1
0.724 0.320 10 94298541 missense variant C/T snv 0.27 0.31 17
rs10505477
CASC8 ; PCAT1 ; POU5F1B
0.658 0.400 8 127395198 intron variant A/G snv 0.40 31
rs1060503115
PMS2
0.763 0.400 7 5978664 missense variant T/A;G snv 13
rs112445441
KRAS
0.658 0.400 12 25245347 missense variant C/A;G;T snv 32
rs1447295
CASC8
0.658 0.400 8 127472793 intron variant A/C;T snv 29
rs2274223
PLCE1
0.620 0.400 10 94306584 missense variant A/G snv 0.28 0.31 40
rs28934575
TP53
0.641 0.400 17 7674230 missense variant C/A;G;T snv 37
rs121918464
PTPN11
0.708 0.440 12 112450406 missense variant G/A;C snv 25
rs752021744
PIK3CB
0.689 0.440 3 138759306 missense variant T/C snv 1.2E-05 29
rs11568820
VDR
0.672 0.480 12 47908762 intron variant C/T snv 0.38 27
rs217727
MRPL23 ; HOTS ; H19
0.641 0.480 11 1995678 non coding transcript exon variant G/A snv 0.20 34
rs746702110
OGG1
0.627 0.480 3 9756778 missense variant C/T snv 1.2E-05 2.8E-05 38
rs121434569
EGFR-AS1 ; EGFR
0.581 0.520 7 55181378 missense variant C/T snv 2.8E-05 5.6E-05 70
rs2227983
EGFR
0.658 0.520 7 55161562 missense variant G/A;C;T snv 0.29 31
rs2736098
TERT
0.600 0.600 5 1293971 synonymous variant C/T snv 0.29 0.22 48
rs833061
VEGFA
0.605 0.600 6 43769749 upstream gene variant C/G;T snv 42
rs121434592
AKT1
0.595 0.640 14 104780214 missense variant C/T snv 4.0E-06 54