Disease: Esophageal carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1057519952
RHOA
0.882 0.160 3 49375577 missense variant G/A snv 5
rs1057519962
SMAD4
0.827 0.160 18 51067035 missense variant G/A;T snv 6
rs1321311 0.742 0.160 6 36655123 regulatory region variant C/A snv 0.28 15
rs4939827
SMAD7
0.708 0.160 18 48927093 intron variant T/A;C snv 25
rs1057519953
RHOA
0.807 0.200 3 49375576 missense variant C/A;T snv 8
rs1057519886
CTNNB1
0.752 0.240 3 41224609 missense variant T/A;C;G snv 11
rs1057519895
FBXW7
0.724 0.240 4 152328232 missense variant C/A;G;T snv 17
rs1057519927
PIK3CA
0.716 0.240 3 179218295 missense variant A/C;G;T snv 19
rs1057519989
TP53
0.732 0.240 17 7674233 missense variant C/A;G;T snv 17
rs1057519995
TP53
0.807 0.240 17 7674200 missense variant T/A snv 9
rs4444235 0.701 0.240 14 53944201 downstream gene variant T/C snv 0.43 23
rs587781991
TP53
0.724 0.240 17 7675208 missense variant C/A;T snv 17
rs765848205
TP53
0.763 0.240 17 7674253 missense variant A/C;G;T snv 12
rs770248150
KRAS
0.807 0.240 12 25225713 missense variant T/A;G snv 4.0E-06 7
rs867384286
FBXW7
0.732 0.240 4 152328233 missense variant G/A;C snv 4.3E-06 14
rs967461896
TP53
0.724 0.240 17 7675086 missense variant A/C;G;T snv 17
rs1057519747
TP53
0.716 0.280 17 7675094 missense variant A/C;G;T snv 23
rs1057519883
CDKN2A
0.742 0.280 9 21971120 missense variant C/G;T snv 14
rs121912580
SMAD4
0.807 0.280 18 51067036 missense variant G/A;C;T snv 7
rs3802842
COLCA2 ; COLCA1
0.695 0.280 11 111300984 intron variant C/A snv 0.71 25
rs786203436
TP53
0.701 0.280 17 7675125 missense variant A/C;G;T snv 20
rs80338963
SMAD4
0.776 0.280 18 51065548 missense variant C/A;G;T snv 11
rs985033810
TP53
0.724 0.280 17 7674232 missense variant C/A;G;T snv 16
rs1057519896
FBXW7
0.742 0.320 4 152326136 missense variant C/A;T snv 12
rs1057519932
PIK3CA
0.683 0.320 3 179234298 missense variant T/G snv 22