Disease: Colorectal Carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs121913281
PIK3CA
0.623 0.520 3 179234296 missense variant C/T snv 37
rs28934575
TP53
0.641 0.400 17 7674230 missense variant C/A;G;T snv 37
rs1463038513
APC
0.658 0.440 5 112839511 frameshift variant TAAA/- delins 36
rs121913274
PIK3CA
0.645 0.320 3 179218304 missense variant A/C;G;T snv 33
rs10936599
MYNN
0.637 0.600 3 169774313 synonymous variant C/T snv 0.29 0.21 32
rs112445441
KRAS
0.658 0.400 12 25245347 missense variant C/A;G;T snv 32
rs10505477
CASC8 ; PCAT1 ; POU5F1B
0.658 0.400 8 127395198 intron variant A/G snv 0.40 31
rs4246215
FADS2 ; FEN1
0.677 0.320 11 61796827 3 prime UTR variant G/C;T snv 29
rs7679673 0.677 0.440 4 105140377 intron variant C/A snv 0.50 28
rs121434596
NRAS
0.677 0.440 1 114716123 missense variant C/A;G;T snv 4.0E-06; 4.0E-06 26
rs121913400
CTNNB1
0.683 0.360 3 41224610 missense variant C/A;G;T snv 26
rs121918464
PTPN11
0.708 0.440 12 112450406 missense variant G/A;C snv 25
rs2735940
TERT
0.689 0.400 5 1296371 upstream gene variant A/G snv 0.49 25
rs3802842
COLCA2 ; COLCA1
0.695 0.280 11 111300984 intron variant C/A snv 0.71 25
rs4939827
SMAD7
0.708 0.160 18 48927093 intron variant T/A;C snv 25
rs121913240
KRAS
0.672 0.440 12 25227342 missense variant T/A;C;G snv 24
rs121913338
BRAF
0.677 0.400 7 140753354 missense variant T/A;C;G snv 24
rs1535
FADS2
0.752 0.240 11 61830500 intron variant A/G snv 0.31 24
rs121913286
PIK3CA
0.677 0.280 3 179218306 missense variant C/A;G snv 23
rs174537
TMEM258 ; MYRF
0.708 0.400 11 61785208 non coding transcript exon variant G/T snv 0.28 23
rs4444235 0.701 0.240 14 53944201 downstream gene variant T/C snv 0.43 23
rs1011970
CDKN2B-AS1
0.677 0.320 9 22062135 intron variant G/T snv 0.23 22
rs7931342 0.689 0.360 11 69227030 intergenic variant T/G snv 0.58 20
rs11200014
FGFR2
0.695 0.280 10 121575416 intron variant G/A;T snv 0.34 19
rs115707823 0.701 0.320 6 30374976 intergenic variant G/A snv 19