Disease: Squamous cell carcinoma of the head and neck
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs121913284
PIK3CA
0.776 0.160 3 179203765 missense variant T/A;G snv 11
rs121913286
PIK3CA
0.677 0.280 3 179218306 missense variant C/A;G snv 23
rs121913287
PIK3CA
0.752 0.400 3 179199088 missense variant G/A snv 12
rs397517201
PIK3CA
0.732 0.240 3 179218307 missense variant A/C;G;T snv 16
rs867262025
PIK3CA
0.790 0.360 3 179221146 missense variant G/A snv 10
rs1057519946
PPP2R1A
0.732 0.280 19 52212729 missense variant C/G;T snv 18
rs1057519947
PPP2R1A
0.790 0.160 19 52212730 missense variant G/A snv 9
rs121909224
PTEN
0.627 0.560 10 87933147 stop gained C/G;T snv 1.2E-05 41
rs121909229
PTEN
0.683 0.400 10 87933148 missense variant G/A;C;T snv 23
rs377767347
SMAD4
0.742 0.520 18 51065549 missense variant G/A;C;T snv 14
rs80338963
SMAD4
0.776 0.280 18 51065548 missense variant C/A;G;T snv 11
rs1057519747
TP53
0.716 0.280 17 7675094 missense variant A/C;G;T snv 23
rs1057519975
TP53
0.649 0.480 17 7675209 missense variant A/C;G;T snv 34
rs1057519977
TP53
0.763 0.360 17 7675189 missense variant G/C snv 13
rs1057519978
TP53
0.763 0.360 17 7675191 missense variant A/C;G;T snv 12
rs1057519981
TP53
0.689 0.440 17 7674251 missense variant A/C;G;T snv 22
rs1057519983
TP53
0.724 0.360 17 7673797 missense variant A/G snv 16
rs1057519985
TP53
0.724 0.360 17 7673763 missense variant T/A;C;G snv 16
rs1057519989
TP53
0.732 0.240 17 7674233 missense variant C/A;G;T snv 17
rs1057519991
TP53
0.662 0.440 17 7675076 missense variant T/A;C;G snv 4.0E-06 26
rs1057519996
TP53
0.701 0.360 17 7675217 splice acceptor variant T/A;C;G snv 19
rs1057519999
TP53
0.763 0.160 17 7674247 missense variant T/C;G snv 12
rs1057520002
TP53
0.695 0.360 17 7674242 missense variant A/C;G snv 20
rs1057520003
TP53
0.695 0.320 17 7675996 missense variant T/G snv 20
rs1057520007
TP53
0.701 0.440 17 7674917 missense variant T/A;C;G snv 21