Disease: Colon Carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs113488022
BRAF
0.351 0.840 7 140753336 missense variant A/C;G;T snv 4.0E-06 490
rs121913377
BRAF
0.354 0.840 7 140753335 missense variant CA/AT;TT mnv 480
rs1045642
ABCB1
0.456 0.840 7 87509329 synonymous variant A/G;T snv 0.50 214
rs121913529
KRAS
0.492 0.680 12 25245350 missense variant C/A;G;T snv 4.0E-06 144
rs2032582
ABCB1
0.538 0.800 7 87531302 missense variant A/C;T snv 0.54; 3.8E-02 97
rs1800469
B9D2 ; TGFB1
0.547 0.760 19 41354391 intron variant A/G snv 0.69 78
rs1222213359
VEGFA
0.574 0.720 6 43770966 missense variant G/A snv 62
rs6983267
PCAT1 ; CCAT2 ; CASC8 ; POU5F1B
0.578 0.440 8 127401060 non coding transcript exon variant G/T snv 0.37 62
rs2236225
MTHFD1
0.614 0.640 14 64442127 missense variant G/A snv 0.44 0.38 52
rs397517132
EGFR
0.623 0.280 7 55191846 missense variant A/T snv 48
rs121913273
PIK3CA
0.605 0.440 3 179218294 missense variant G/A;C snv 44
rs1801155
APC
0.649 0.440 5 112839514 missense variant T/A snv 8.0E-06; 2.0E-03 1.2E-03 42
rs1463038513
APC
0.658 0.440 5 112839511 frameshift variant TAAA/- delins 36
rs112445441
KRAS
0.658 0.400 12 25245347 missense variant C/A;G;T snv 32
rs760043106
TP53
0.645 0.440 17 7674947 missense variant A/C;G;T snv 32
rs121913495
GNAS
0.672 0.400 20 58909366 missense variant G/A;T snv 28
rs3802842
COLCA2 ; COLCA1
0.695 0.280 11 111300984 intron variant C/A snv 0.71 25
rs4939827
SMAD7
0.708 0.160 18 48927093 intron variant T/A;C snv 25
rs4444235 0.701 0.240 14 53944201 downstream gene variant T/C snv 0.43 23
rs12953717
SMAD7
0.724 0.240 18 48927559 intron variant C/T snv 0.36 18
rs16892766 0.716 0.240 8 116618444 intergenic variant A/C snv 9.3E-02 18
rs10795668
LOC105376400
0.724 0.160 10 8659256 upstream gene variant G/A snv 0.24 17
rs4779584 0.732 0.160 15 32702555 intergenic variant T/C snv 0.67 16
rs7758229
SLC22A3
0.732 0.120 6 160419220 intron variant G/A;T snv 16