DisGeNET - a database of gene-disease associations

List of shared variants

Coronary Arteriosclerosis, C0010054

Disease: Metabolic Syndrome X

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs10920501		0.827	0.120	1	190092815	downstream gene variant	A/T	snv		0.18	5
rs3732581	PARL	0.790	0.120	3	183840614	missense variant	C/G;T	snv	0.46; 1.2E-05		9
rs7819412	XKR6	0.827	0.120	8	11187652	intron variant	G/A;T	snv			6
rs1049673	CD36	0.807	0.160	7	80677034	3 prime UTR variant	C/G;T	snv			7
rs116843064	ANGPTL4	0.776	0.160	19	8364439	missense variant	G/A	snv	1.3E-02	1.5E-02	16
rs1320702652	MFAP1	0.752	0.160	15	43824536	missense variant	G/A	snv	4.0E-06		11
rs185847354	ADIPOQ ; ADIPOQ-AS1	0.763	0.160	3	186854460	missense variant	T/C	snv	3.1E-04	7.0E-05	11
rs9282541	ABCA1	0.790	0.160	9	104858554	missense variant	G/A	snv	1.3E-02	4.4E-03	13
rs965384857	LPL	0.827	0.160	8	19954234	missense variant	G/A	snv	4.0E-06		5
rs2000813	LIPG	0.763	0.200	18	49567494	missense variant	C/A;T	snv	4.0E-06; 0.27; 4.0E-06	0.23	9
rs2943634		0.763	0.200	2	226203364	intergenic variant	A/C;G	snv			15
rs174547	FADS2 ; FADS1	0.742	0.240	11	61803311	intron variant	T/C	snv		0.28	33
rs1800775	CETP	0.790	0.240	16	56961324	upstream gene variant	C/A;G	snv	0.51; 5.7E-06		18
rs780093	GCKR	0.763	0.240	2	27519736	intron variant	T/C	snv		0.68	30
rs2383207	CDKN2B-AS1	0.695	0.280	9	22115960	intron variant	A/G	snv		0.64	22
rs3091244	CRP	0.724	0.280	1	159714875	upstream gene variant	G/A;T	snv			17
rs1761667	CD36	0.752	0.320	7	80615623	intron variant	G/A	snv		0.49	12
rs2295490	TRIB3	0.724	0.320	20	388261	missense variant	A/G;T	snv	0.18; 4.0E-06		16
rs2516839	USF1	0.732	0.320	1	161043331	5 prime UTR variant	C/T	snv		0.49	14
rs660339	UCP2	0.695	0.320	11	73978059	missense variant	G/A	snv	0.41	0.43	24
rs80356814	LMNA	0.732	0.320	1	156138697	synonymous variant	C/T	snv	8.0E-06		15
rs11066001	BRAP	0.763	0.360	12	111681367	intron variant	T/C	snv		5.8E-03	15
rs1051931	PLA2G7	0.708	0.400	6	46705206	missense variant	A/G	snv	0.81	0.79	19
rs16147	LOC107986777 ; NPY	0.695	0.400	7	24283791	upstream gene variant	T/C	snv		0.48	18
rs3135506	APOA5	0.708	0.400	11	116791691	missense variant	G/A;C	snv	3.0E-05; 6.8E-02		26