Disease: Inflammatory Bowel Diseases
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs235768
BMP2
0.807 0.160 20 6778468 missense variant A/G;T snv 0.67 8
rs2277680
CXCL16
0.776 0.160 17 4735268 missense variant G/A snv 0.47 0.41 10
rs17293632
SMAD3
0.763 0.240 15 67150258 intron variant C/T snv 0.17 12
rs1239681664
ABCA1
0.716 0.320 9 104818690 synonymous variant A/G snv 7.0E-06 15
rs2227564
PLAU ; C10orf55
0.763 0.320 10 73913343 missense variant T/C snv 0.75 0.81 15
rs10754558
NLRP3
0.695 0.480 1 247448734 3 prime UTR variant G/C;T snv 20
rs2043211
CARD8
0.653 0.480 19 48234449 missense variant A/T snv 0.33 0.29 29
rs2066853
AHR
0.653 0.600 7 17339486 missense variant G/A snv 0.15 0.22 34
rs653178
ATXN2
0.672 0.600 12 111569952 intron variant C/T snv 0.67 41
rs6025
F5
0.637 0.560 1 169549811 missense variant C/T snv 1.8E-02 43
rs2066845
NOD2
0.611 0.600 16 50722629 missense variant G/C;T snv 1.1E-02; 2.2E-04 46
rs2292832
MIR149 ; GPC1 ; LOC100130449
0.605 0.640 2 240456086 non coding transcript exon variant T/A;C snv 0.59 46
rs56149945
NR3C1
0.595 0.680 5 143399752 missense variant T/A;C snv 2.0E-02 49
rs2430561
IFNG ; IFNG-AS1
0.590 0.760 12 68158742 intron variant T/A snv 0.36 50
rs1143634
IL1B
0.597 0.680 2 112832813 synonymous variant G/A snv 0.19 0.19 52
rs2066844
NOD2
0.587 0.520 16 50712015 missense variant C/T snv 2.6E-02 2.9E-02 54
rs28362491
LOC105377621 ; NFKB1
0.592 0.720 4 102500998 non coding transcript exon variant ATTG/- delins 56
rs2228145
IL6R
0.602 0.720 1 154454494 missense variant A/C;T snv 0.38; 1.2E-05 57
rs751377893
F5
0.574 0.680 1 169546513 missense variant T/C snv 4.0E-06 65
rs899127658
F2
0.547 0.720 11 46739084 missense variant G/A;C snv 82
rs3184504
SH2B3 ; ATXN2
0.572 0.600 12 111446804 missense variant T/A;C;G snv 0.67 92
rs2032582
ABCB1
0.538 0.800 7 87531302 missense variant A/C;T snv 0.54; 3.8E-02 97
rs5498
ICAM4 ; ICAM1
0.531 0.760 19 10285007 missense variant A/G snv 0.44 0.37 99
rs1188383936
F2
0.524 0.760 11 46725976 missense variant C/T snv 8.0E-06 102
rs2275913
IL17A
0.514 0.760 6 52186235 upstream gene variant G/A snv 0.28 105