DisGeNET - a database of gene-disease associations

List of shared variants

Diabetes Mellitus, C0011849

Disease: Breast Carcinoma

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs2241745	IRS2	0.882	0.120	13	109770184	intron variant	C/T	snv		0.88	4
rs2605039	HSPD1	0.882	0.120	2	197498127	intron variant	C/A	snv		0.71	4
rs4876369	SLC30A8 ; LOC105375716	0.882	0.120	8	117151265	intron variant	A/G	snv		0.10	4
rs10636	MT2A	0.851	0.160	16	56609431	3 prime UTR variant	G/C	snv		0.26	7
rs11196172	TCF7L2	0.708	0.200	10	112967084	intron variant	G/A	snv		0.13	18
rs11212617	C11orf65	0.827	0.200	11	108412434	intron variant	C/A	snv		0.49	7
rs11915160	SOX2 ; SOX2-OT	0.851	0.200	3	181713783	3 prime UTR variant	C/A	snv		0.11	5
rs2188380	LINC01405	0.851	0.200	12	110948323	intron variant	T/C	snv		4.7E-03	6
rs1693482	ADH1C ; ADH1B	0.807	0.240	4	99342808	missense variant	C/T	snv	0.34	0.31	12
rs2230774	ROCK2	0.807	0.240	2	11218994	missense variant	G/C;T	snv	0.49		12
rs1520220	LINC02456 ; IGF1	0.807	0.280	12	102402744	intron variant	G/C;T	snv		0.76	9
rs2072668	OGG1	0.732	0.280	3	9756456	intron variant	C/G	snv	0.28	0.24	14
rs12325817	PEMT	0.807	0.320	17	17583205	intron variant	C/A;G;T	snv			7
rs1333048	CDKN2B-AS1	0.683	0.320	9	22125348	intron variant	A/C	snv		0.44	24
rs2853669	TERT	0.649	0.320	5	1295234	upstream gene variant	A/G	snv		0.25	35
rs16917496	KMT5A	0.689	0.360	12	123409283	3 prime UTR variant	C/G;T	snv			21
rs1805097	IRS2	0.689	0.360	13	109782884	missense variant	C/G;T	snv	0.35		22
rs1862513	RETN	0.763	0.360	19	7668907	upstream gene variant	C/G;T	snv			11
rs228648	UTS2	0.776	0.360	1	7853370	missense variant	G/A	snv	0.51	0.52	13
rs4149117	SLCO1B3-SLCO1B7 ; SLCO1B3	0.763	0.360	12	20858546	missense variant	T/C;G	snv	0.81		15
rs7080536	HABP2 ; NRAP	0.683	0.360	10	113588287	missense variant	G/A	snv	2.2E-02	2.4E-02	27
rs10811661		0.724	0.400	9	22134095	intergenic variant	T/C	snv		0.14	22
rs1800449	LOX	0.641	0.400	5	122077513	missense variant	C/A;T	snv	4.0E-06; 0.17		33
rs1801516	ATM	0.627	0.400	11	108304735	missense variant	G/A	snv	0.11	0.11	39
rs184003	AGER	0.724	0.400	6	32182519	intron variant	C/A	snv	0.12	0.12	15