Disease: Lupus Erythematosus, Systemic
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1003878
TSBP1-AS1 ; TSBP1
0.882 0.200 6 32332045 stop gained G/A snv 0.19 0.23 3
rs10181656
STAT4
0.763 0.360 2 191105153 intron variant G/C snv 0.79 9
rs1041981
LOC100287329 ; LTA
0.667 0.520 6 31573007 missense variant C/A snv 0.35 0.38 25
rs1077393
BAG6
0.882 0.200 6 31642752 non coding transcript exon variant A/G snv 0.44 3
rs10822050 0.724 0.240 10 62679011 downstream gene variant T/C snv 0.33 14
rs10889677
IL23R
0.627 0.720 1 67259437 3 prime UTR variant C/A snv 0.27 40
rs10988542
FNBP1
0.724 0.240 9 129894985 intron variant G/A;C snv 14
rs11145763
CARD9
0.724 0.240 9 136369144 intron variant A/C;G;T snv 14
rs11203203
UBASH3A
0.807 0.240 21 42416077 intron variant G/A snv 0.28 9
rs11229
PRRC2A
0.851 0.280 6 31635993 synonymous variant A/G snv 0.14 0.17 6
rs1143679
ITGAM
0.732 0.520 16 31265490 missense variant G/A snv 9.7E-02 0.11 14
rs114846446
LINC01250
0.724 0.240 2 2944140 intron variant G/A snv 9.5E-03 14
rs1150754
TNXB
0.851 0.200 6 32082981 intron variant C/A;T snv 4
rs11580078
C1orf141 ; IL23R
0.724 0.240 1 67203951 intron variant C/A;G snv 14
rs11594656 0.776 0.240 10 6080046 intergenic variant T/A snv 0.18 9
rs117372389
NKD1
0.724 0.240 16 50634166 3 prime UTR variant G/T snv 1.1E-02 14
rs11741255
IRF1-AS1
0.724 0.240 5 132475490 intron variant G/A snv 0.29 14
rs11839053 0.724 0.240 13 106410694 intergenic variant T/C snv 7.0E-02 14
rs11889341
STAT4
0.732 0.480 2 191079016 intron variant C/T snv 0.21 12
rs1205538057
ACE
0.827 0.200 17 63483937 missense variant A/G snv 4.0E-06 5
rs12150220
NLRP1
0.724 0.360 17 5582047 missense variant A/T snv 0.37 0.33 14
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs12232497 0.701 0.360 17 39883866 intergenic variant T/C snv 0.35 18
rs1235162
GABBR1
0.827 0.280 6 29569447 intron variant A/G snv 6.0E-02 6
rs1250563
ZMIZ1
0.724 0.240 10 79287626 intron variant G/C snv 0.24 14