DisGeNET - a database of gene-disease associations

List of shared variants

Diabetes Mellitus, Insulin-Dependent, C0011854

Disease: Diabetic Nephropathy

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1416580204	MOK	0.608	0.720	14	102250837	missense variant	C/T	snv	4.0E-06	7.0E-06	49
rs1217691063	MTHFR	0.330	0.920	1	11796309	missense variant	A/G	snv	4.0E-06	7.0E-06	614
rs397507444	MTHFR	0.405	0.880	1	11794407	missense variant	T/G	snv			306
rs11651270	NLRP1	0.882	0.240	17	5521757	missense variant	T/C	snv	0.45	0.47	4
rs2670660	NLRP1	0.708	0.400	17	5615686	intron variant	A/G	snv		0.41	15
rs1799983	NOS3	0.430	0.880	7	150999023	missense variant	T/A;G	snv	0.75		246
rs1800783	NOS3	0.827	0.280	7	150992309	intron variant	A/C;G;T	snv			7
rs16139	NPY ; LOC107986777	0.658	0.560	7	24285260	missense variant	T/A;C	snv	4.0E-06; 3.0E-02		36
rs1800566	NQO1	0.576	0.680	16	69711242	missense variant	G/A	snv	0.25	0.21	59
rs662	PON1	0.485	0.840	7	95308134	missense variant	T/C	snv	0.38	0.42	157
rs854560	PON1	0.513	0.800	7	95316772	missense variant	A/C;G;N;T	snv	0.29		113
rs1801282	PPARG	0.500	0.840	3	12351626	missense variant	C/G	snv	0.11	8.9E-02	131
rs1805192	PPARG	0.510	0.840	3	12379739	missense variant	C/G	snv			121
rs316019	SLC22A2	0.790	0.360	6	160249250	missense variant	A/C	snv	0.90	0.89	8
rs2457576	SLC22A3	0.925	0.200	6	160444587	intron variant	G/C	snv		0.27	2
rs3820589	SLC2A1 ; SLC2A1-AS1	0.925	0.200	1	42960373	intron variant	A/T	snv		8.3E-02	2
rs2234694	SOD1	0.882	0.240	21	31666552	intron variant	A/C	snv	3.6E-02	3.4E-02	3
rs4880	SOD2	0.500	0.840	6	159692840	missense variant	A/G	snv	0.48	0.47	131
rs1326934	SORBS1	0.925	0.200	10	95524324	intron variant	C/T	snv		0.63	2
rs12976445	SPACA6 ; SPACA6P-AS ; MIRLET7E ; MIR125A	0.689	0.600	19	51693200	non coding transcript exon variant	T/C	snv		0.45	20
rs237025	SUMO4 ; TAB2	0.672	0.360	6	149400554	missense variant	G/A	snv	0.55	0.57	26
rs7903146	TCF7L2	0.554	0.680	10	112998590	intron variant	C/G;T	snv			93
rs4986790	TLR4	0.438	0.800	9	117713024	missense variant	A/G;T	snv	6.1E-02; 4.0E-06		223
rs4986791	TLR4	0.456	0.840	9	117713324	missense variant	C/T	snv	5.7E-02	4.9E-02	182
rs1800629	TNF	0.472	0.920	6	31575254	upstream gene variant	G/A	snv	0.12	0.14	169