DisGeNET - a database of gene-disease associations

List of shared variants

Diabetes Mellitus, Non-Insulin-Dependent, C0011860

Disease: Diabetes Mellitus, Insulin-Dependent

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1001179	CAT	0.641	0.680	11	34438684	upstream gene variant	C/T	snv		0.16	33
rs10181656	STAT4	0.763	0.360	2	191105153	intron variant	G/C	snv		0.79	9
rs1041981	LOC100287329 ; LTA	0.667	0.520	6	31573007	missense variant	C/A	snv	0.35	0.38	25
rs1042713	ADRB2	0.576	0.800	5	148826877	missense variant	G/A	snv	0.42	0.43	63
rs1063856	VWF	0.763	0.400	12	6044368	missense variant	T/C;G	snv	0.31		14
rs10735810	VDR	0.662	0.640	12	47879112	start lost	A/C;G;T	snv			26
rs10741657	CYP2R1	0.637	0.520	11	14893332	upstream gene variant	A/G	snv		0.65	34
rs10758593	GLIS3	0.827	0.240	9	4292083	intron variant	G/A	snv		0.45	8
rs10811661		0.724	0.400	9	22134095	intergenic variant	T/C	snv		0.14	22
rs11154178	LOC105377982 ; TRDN	0.807	0.240	6	123540174	intron variant	T/A;C	snv			7
rs1121980	FTO	0.807	0.240	16	53775335	intron variant	G/A;C	snv			18
rs1131580	TNFSF10	0.882	0.160	3	172505830	3 prime UTR variant	A/C;G;T	snv			4
rs1137101	LEPR	0.554	0.760	1	65592830	missense variant	A/G	snv	0.51	0.50	77
rs11568820	VDR	0.672	0.480	12	47908762	intron variant	C/T	snv		0.38	27
rs11614913	HOXC6 ; MIR196A2	0.512	0.760	12	53991815	mature miRNA variant	C/T	snv	0.39	0.34	111
rs1205538057	ACE	0.827	0.200	17	63483937	missense variant	A/G	snv	4.0E-06		5
rs1217691063	MTHFR	0.330	0.920	1	11796309	missense variant	A/G	snv	4.0E-06	7.0E-06	614
rs12255372	TCF7L2	0.667	0.480	10	113049143	intron variant	G/A;T	snv			28
rs1260326	GCKR	0.645	0.600	2	27508073	missense variant	T/C;G	snv	0.63; 4.0E-06	0.68	81
rs1267969615	ACE	0.532	0.760	17	63490960	missense variant	T/C	snv	4.0E-06		100
rs12785878	NADSYN1	0.677	0.520	11	71456403	intron variant	G/A;T	snv			25
rs12794714	CYP2R1	0.708	0.360	11	14892029	synonymous variant	G/A	snv	0.41	0.35	15
rs13266634	SLC30A8 ; LOC105375716	0.724	0.480	8	117172544	missense variant	C/A;T	snv	0.29		23
rs1332629192	ALB	0.851	0.200	4	73404374	missense variant	C/T	snv			7
rs1358030		0.925	0.120	10	106363841	intergenic variant	G/A	snv		0.57	2