DisGeNET - a database of gene-disease associations

List of shared variants

Diabetes Mellitus, Non-Insulin-Dependent, C0011860

Disease: Colorectal Carcinoma

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1041981	LOC100287329 ; LTA	0.667	0.520	6	31573007	missense variant	C/A	snv	0.35	0.38	25
rs1042522	TP53	0.426	0.800	17	7676154	missense variant	G/C;T	snv	0.67		242
rs1044498	ENPP1	0.752	0.360	6	131851228	missense variant	A/C;G	snv	0.19		15
rs1045642	ABCB1	0.456	0.840	7	87509329	synonymous variant	A/G;T	snv	0.50		214
rs1050450	GPX1	0.623	0.600	3	49357401	missense variant	G/A	snv	0.28	0.30	43
rs1052133	OGG1 ; CAMK1	0.476	0.800	3	9757089	missense variant	C/G	snv	0.27	0.22	147
rs1057910	CYP2C9	0.776	0.280	10	94981296	missense variant	A/C;G	snv	6.3E-02; 4.0E-06		12
rs10741657	CYP2R1	0.637	0.520	11	14893332	upstream gene variant	A/G	snv		0.65	34
rs10759932	TLR4	0.732	0.560	9	117702866	upstream gene variant	T/C	snv		0.18	15
rs11077	POLR1C ; XPO5	0.732	0.320	6	43523209	3 prime UTR variant	T/G	snv		0.47	14
rs1131691014	TP53	0.439	0.800	17	7676154	frameshift variant	-/C	ins			214
rs1136410	PARP1	0.559	0.760	1	226367601	missense variant	A/G	snv	0.21	0.15	70
rs1138272	GSTP1	0.611	0.600	11	67586108	missense variant	C/T	snv	5.9E-02	5.5E-02	42
rs11556218	IL16	0.653	0.600	15	81305928	missense variant	T/G	snv	9.6E-02	0.12	27
rs11568820	VDR	0.672	0.480	12	47908762	intron variant	C/T	snv		0.38	27
rs11614913	HOXC6 ; MIR196A2	0.512	0.760	12	53991815	mature miRNA variant	C/T	snv	0.39	0.34	111
rs1188383936	F2	0.524	0.760	11	46725976	missense variant	C/T	snv	8.0E-06		102
rs1217691063	MTHFR	0.330	0.920	1	11796309	missense variant	A/G	snv	4.0E-06	7.0E-06	614
rs12255372	TCF7L2	0.667	0.480	10	113049143	intron variant	G/A;T	snv			28
rs1260326	GCKR	0.645	0.600	2	27508073	missense variant	T/C;G	snv	0.63; 4.0E-06	0.68	81
rs1267969615	ACE	0.532	0.760	17	63490960	missense variant	T/C	snv	4.0E-06		100
rs12778366	SIRT1	0.724	0.480	10	67883321	upstream gene variant	T/C;G	snv			13
rs12785878	NADSYN1	0.677	0.520	11	71456403	intron variant	G/A;T	snv			25
rs12794714	CYP2R1	0.708	0.360	11	14892029	synonymous variant	G/A	snv	0.41	0.35	15
rs14035	RAN	0.742	0.320	12	130876696	3 prime UTR variant	C/T	snv		0.33	15