DisGeNET - a database of gene-disease associations

List of shared variants

Diabetes Mellitus, Non-Insulin-Dependent, C0011860

Disease: Diabetes Mellitus

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs10224002	PRKAG2	0.925	0.080	7	151717955	intron variant	A/G	snv		0.31	12
rs1036483919	GCK	0.925	0.080	7	44151050	missense variant	A/G	snv	4.0E-06		4
rs1057520504	HNF1A	0.882	0.080	12	120994238	missense variant	G/A	snv			4
rs10885390		0.925	0.080	10	112881038	regulatory region variant	T/A	snv		0.30	3
rs121908279	INS ; INS-IGF2	0.925	0.080	11	2159983	missense variant	G/T	snv	2.5E-05	2.1E-05	3
rs121912645	KLF11	0.882	0.080	2	10048376	missense variant	G/T	snv	1.3E-04	8.4E-05	4
rs12363572		0.925	0.080	11	68621498	upstream gene variant	C/T	snv		0.10	3
rs1272388614	ABCC8	0.851	0.080	11	17395658	missense variant	C/T	snv	2.4E-05	3.5E-05	5
rs1308346790	RBPJ	0.925	0.080	4	26430444	missense variant	T/C	snv	4.0E-06		3
rs1364181648	SHOC1	0.925	0.080	9	111738418	missense variant	A/G	snv	8.0E-06		3
rs137852783	PDX1	0.882	0.080	13	27920364	missense variant	G/A;T	snv	2.9E-03		4
rs137852784	PDX1	0.925	0.080	13	27920314	missense variant	A/T	snv	1.5E-05	1.4E-05	3
rs137852785	PDX1	0.925	0.080	13	27920190	missense variant	T/C	snv	1.1E-04	1.0E-04	3
rs137852787	PDX1	0.882	0.080	13	27924519	missense variant	G/A	snv	1.3E-03	2.0E-04	5
rs137853240	HNF1A	0.807	0.080	12	120994405	missense variant	G/A	snv		1.4E-05	8
rs142727972	EHMT1	0.925	0.080	9	137743479	missense variant	C/G;T	snv	4.0E-06; 7.6E-05		3
rs1551305	TPCN2	0.925	0.080	11	69087765	intron variant	G/A;C;T	snv			3
rs1570056	MAP3K5	0.925	0.080	6	136738789	intron variant	T/C	snv		0.52	3
rs161364	TRPV1	0.925	0.080	17	3574518	intron variant	C/T	snv		0.22	3
rs16860234	IGF2BP2	0.925	0.080	3	185793096	intron variant	A/C	snv		0.33	3
rs17106184	FAF1	0.925	0.080	1	50444313	intron variant	G/A	snv		8.5E-02	3
rs17584499	PTPRD	0.925	0.080	9	8879118	intron variant	C/T	snv		0.14	3
rs17697419	LOC105377555 ; VEGFC	1.000	0.080	4	176687012	intron variant	G/A	snv		8.5E-02	2
rs17697515	VEGFC ; LOC105377555	1.000	0.080	4	176689270	intron variant	C/T	snv		5.1E-02	2
rs1799854	ABCC8	0.925	0.080	11	17427157	splice region variant	G/A	snv	0.44	0.37	3