DisGeNET - a database of gene-disease associations

List of shared variants

Diabetes Mellitus, Non-Insulin-Dependent, C0011860

Disease: Malignant neoplasm of stomach

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	Num. diseases
rs1042522	TP53	0.426	0.800	17	7676154	missense variant	G/C;T	snv	0.67	242
rs1045642	ABCB1	0.456	0.840	7	87509329	synonymous variant	A/G;T	snv	0.50	214
rs1131691014	TP53	0.439	0.800	17	7676154	frameshift variant	-/C	ins		214
rs12255372	TCF7L2	0.667	0.480	10	113049143	intron variant	G/A;T	snv		28
rs1458766475	C1orf112 ; SELE	0.637	0.680	1	169732649	missense variant	C/G;T	snv	4.0E-06; 4.0E-06	41
rs1799983	NOS3	0.430	0.880	7	150999023	missense variant	T/A;G	snv	0.75	246
rs1805192	PPARG	0.510	0.840	3	12379739	missense variant	C/G	snv		121
rs20417	PACERR ; PTGS2	0.576	0.600	1	186681189	non coding transcript exon variant	C/G;T	snv		57
rs217727	MRPL23 ; HOTS ; H19	0.641	0.480	11	1995678	non coding transcript exon variant	G/A	snv	0.20	34
rs2228145	IL6R	0.602	0.720	1	154454494	missense variant	A/C;T	snv	0.38; 1.2E-05	57
rs2228570	VDR	0.521	0.760	12	47879112	start lost	A/C;G;T	snv	0.63	99
rs266729	ADIPOQ	0.637	0.560	3	186841685	upstream gene variant	C/A;G;T	snv		37
rs3811463	LIN28A	0.752	0.400	1	26427451	3 prime UTR variant	T/A;C	snv		14
rs397507444	MTHFR	0.405	0.880	1	11794407	missense variant	T/G	snv		306
rs4754	SPP1	0.752	0.360	4	87981540	missense variant	T/A;C	snv	0.32	12
rs4986790	TLR4	0.438	0.800	9	117713024	missense variant	A/G;T	snv	6.1E-02; 4.0E-06	223
rs505922	ABO	0.689	0.520	9	133273813	intron variant	C/T	snv		34
rs5275	PTGS2	0.583	0.560	1	186673926	3 prime UTR variant	A/G;T	snv		55
rs699947	VEGFA	0.570	0.680	6	43768652	upstream gene variant	A/C;T	snv		67
rs7041	GC	0.576	0.800	4	71752617	missense variant	A/C;T	snv	0.52; 4.0E-06	64
rs763059810	CXCR4	0.623	0.600	2	136115750	missense variant	T/C	snv	4.0E-06	41
rs7903146	TCF7L2	0.554	0.680	10	112998590	intron variant	C/G;T	snv		93
rs822395	ADIPOQ	0.776	0.240	3	186849018	intron variant	C/A;G	snv		10
rs854560	PON1	0.513	0.800	7	95316772	missense variant	A/C;G;N;T	snv	0.29	113
rs878854066	TP53	0.439	0.800	17	7676153	missense variant	GG/AC	mnv		213