DisGeNET - a database of gene-disease associations

List of shared variants

Diabetes Mellitus, Non-Insulin-Dependent, C0011860

Disease: Atherosclerosis

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF GENOME	Num. diseases
rs10455872	LPA	0.662	0.320	6	160589086	intron variant	A/G	snv	4.3E-02	33
rs10757274	CDKN2B-AS1	0.701	0.320	9	22096056	intron variant	A/G	snv	0.41	22
rs10757278	CDKN2B-AS1	0.620	0.520	9	22124478	intron variant	A/G	snv	0.40	44
rs1282382243	DLEU7-AS1 ; DLEU1 ; DLEU7	0.807	0.120	13	50843630	missense variant	G/A	snv		8
rs1333049	CDKN2B-AS1	0.614	0.520	9	22125504	intron variant	G/C	snv	0.41	60
rs1403934301	SHBG	0.882	0.120	17	7631317	missense variant	G/A	snv		3
rs16147	LOC107986777 ; NPY	0.695	0.400	7	24283791	upstream gene variant	T/C	snv	0.48	18
rs16933090	SOX6	0.790	0.160	11	16434247	5 prime UTR variant	C/T	snv	0.12	7
rs1800795	IL6-AS1 ; IL6 ; STEAP1B	0.494	0.840	7	22727026	intron variant	C/G	snv	0.71	140
rs1800871	IL19 ; IL10	0.508	0.800	1	206773289	5 prime UTR variant	A/G	snv	0.69	108
rs1800872	IL19 ; IL10	0.495	0.840	1	206773062	5 prime UTR variant	T/G	snv	0.69	119
rs1800896	IL19 ; IL10	0.507	0.800	1	206773552	intron variant	T/C	snv	0.41	113
rs1805192	PPARG	0.510	0.840	3	12379739	missense variant	C/G	snv		121
rs1862513	RETN	0.763	0.360	19	7668907	upstream gene variant	C/G;T	snv		11
rs1927911	TLR4	0.658	0.640	9	117707776	intron variant	A/G	snv	0.62	28
rs198389	NPPB	0.776	0.240	1	11859214	upstream gene variant	A/G	snv	0.39	10
rs20417	PACERR ; PTGS2	0.576	0.600	1	186681189	non coding transcript exon variant	C/G;T	snv		57
rs2144908	LOC105372629 ; HNF4A	0.851	0.120	20	44357077	intron variant	G/A	snv	0.18	5
rs2518136	AHSG	0.851	0.120	3	186620038	intron variant	T/C	snv	0.46	4
rs2943634		0.763	0.200	2	226203364	intergenic variant	A/C;G	snv		15
rs2943641		0.763	0.160	2	226229029	intergenic variant	T/C	snv	0.67	18
rs397507444	MTHFR	0.405	0.880	1	11794407	missense variant	T/G	snv		306
rs405509	APOE	0.667	0.480	19	44905579	upstream gene variant	T/G	snv	0.58	30
rs46522	UBE2Z	0.807	0.120	17	48911235	non coding transcript exon variant	C/T	snv	0.40	8
rs599839	PSRC1	0.724	0.360	1	109279544	downstream gene variant	G/A;C	snv		27