Disease: Primary malignant neoplasm
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs4430796
HNF1B
0.790 0.280 17 37738049 intron variant A/G snv 0.52 14
rs7501939
HNF1B
0.776 0.280 17 37741165 intron variant C/T snv 0.41 12
rs2229094
LOC100287329 ; LTA
0.776 0.320 6 31572779 missense variant T/C snv 0.27 0.27 17
rs2853669
TERT
0.649 0.320 5 1295234 upstream gene variant A/G snv 0.25 35
rs4819554
IL17RA
0.776 0.320 22 17084145 upstream gene variant G/A snv 0.84 10
rs17251221
CASR
0.724 0.360 3 122274400 intron variant A/G snv 0.11 18
rs2149356
TLR4
0.742 0.360 9 117711921 intron variant T/G snv 0.54 14
rs35767
IGF1 ; LOC105369944
0.763 0.360 12 102481791 upstream gene variant A/C;G;T snv 13
rs1799930
NAT2
0.716 0.400 8 18400593 missense variant G/A snv 0.27 0.27 17
rs1800497
ANKK1
0.620 0.400 11 113400106 missense variant G/A snv 0.26 0.26 56
rs189037
ATM ; NPAT
0.689 0.400 11 108223106 5 prime UTR variant G/A snv 0.49 22
rs2066847
NOD2
0.716 0.400 16 50729868 frameshift variant C/-;CC delins 1.5E-02 18
rs2735940
TERT
0.689 0.400 5 1296371 upstream gene variant A/G snv 0.49 25
rs4746
GLO1
0.708 0.400 6 38682852 missense variant T/A;G snv 0.36 21
rs549591993
F7
0.776 0.400 13 113105794 5 prime UTR variant C/A snv 4.0E-04 2.8E-05 12
rs6214
LINC02456 ; HELLPAR ; IGF1
0.672 0.400 12 102399791 3 prime UTR variant C/T snv 0.45 26
rs822396
ADIPOQ
0.732 0.400 3 186849088 intron variant G/A snv 0.81 16
rs17107315
SPINK1
0.620 0.440 5 147828115 missense variant T/C snv 9.1E-03 8.2E-03 40
rs2057482
HIF1A-AS2 ; HIF1A-AS3 ; HIF1A
0.701 0.440 14 61747130 3 prime UTR variant T/C snv 0.84 0.80 21
rs3856806
PPARG
0.637 0.440 3 12434058 synonymous variant C/T snv 0.13 0.11 41
rs6983267
PCAT1 ; CCAT2 ; CASC8 ; POU5F1B
0.578 0.440 8 127401060 non coding transcript exon variant G/T snv 0.37 62
rs11568820
VDR
0.672 0.480 12 47908762 intron variant C/T snv 0.38 27
rs1800624
PBX2 ; AGER
0.658 0.480 6 32184610 upstream gene variant A/G;T snv 33
rs217727
MRPL23 ; HOTS ; H19
0.641 0.480 11 1995678 non coding transcript exon variant G/A snv 0.20 34
rs2282679
GC
0.645 0.480 4 71742666 intron variant T/G snv 0.21 38