Disease: Metabolic Syndrome X
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs8050136
FTO
0.716 0.560 16 53782363 intron variant C/A snv 0.40 32
rs9939609
FTO
0.559 0.720 16 53786615 intron variant T/A snv 0.41 98
rs9940128
FTO
0.851 0.120 16 53766842 intron variant G/A snv 0.42 10
rs2470890
CYP1A2
0.742 0.320 15 74755085 synonymous variant T/C snv 0.57 12
rs2236242
SERPINA12
0.776 0.280 14 94493715 intron variant T/A snv 0.31 9
rs225014
DIO2
0.695 0.400 14 80203237 missense variant T/C snv 0.41 0.39 22
rs1411766
LOC101927627
0.882 0.160 13 109599813 intron variant G/A;T snv 3
rs11063069
CCND2-AS1
0.925 0.080 12 4265207 intron variant A/G snv 0.20 2
rs11066280
HECTD4
0.742 0.280 12 112379979 intron variant T/A snv 7.0E-03 27
rs137853240
HNF1A
0.807 0.080 12 120994405 missense variant G/A snv 1.4E-05 8
rs1544410
VDR
0.542 0.760 12 47846052 intron variant C/A;G;T snv 78
rs2074356
HECTD4
0.763 0.280 12 112207597 intron variant G/A snv 3.8E-03 18
rs5443
CDCA3 ; GNB3
0.532 0.760 12 6845711 synonymous variant C/T snv 0.36 0.44 106
rs671
ALDH2
0.529 0.840 12 111803962 missense variant G/A snv 1.9E-02 5.8E-03 116
rs7138803 0.827 0.240 12 49853685 intergenic variant G/A;T snv 17
rs10830962 0.851 0.160 11 92965261 upstream gene variant C/A;G;T snv 7
rs12221497
NR1H3
0.882 0.160 11 47259102 splice region variant G/A snv 0.11 4
rs1387153 0.807 0.200 11 92940662 downstream gene variant C/G;T snv 10
rs163182
KCNQ1
0.882 0.160 11 2822986 intron variant G/A;C snv 3
rs2075290
ZPR1
0.882 0.160 11 116782580 intron variant C/G;T snv 10
rs2075291
APOA5 ; ZPR1
0.752 0.400 11 116790676 missense variant C/A;T snv 6.4E-03; 4.0E-06 15
rs2237895
KCNQ1
0.790 0.240 11 2835964 intron variant A/C;T snv 10
rs2279238
NR1H3
0.790 0.320 11 47260473 missense variant C/T snv 0.26 0.26 11
rs3135506
APOA5
0.708 0.400 11 116791691 missense variant G/A;C snv 3.0E-05; 6.8E-02 26
rs4757268
PDE3B
0.827 0.120 11 14789216 synonymous variant A/G snv 0.63 0.64 6