Disease: High density lipoprotein measurement
Source: GWASCAT ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs3184504
SH2B3 ; ATXN2
0.572 0.600 12 111446804 missense variant T/A;C;G snv 0.67 61
rs780094
GCKR
0.658 0.400 2 27518370 intron variant T/C snv 0.67 35
rs4420638
APOC1
0.708 0.520 19 44919689 downstream gene variant A/G snv 0.18 30
rs10401969
SUGP1
0.776 0.240 19 19296909 intron variant T/C snv 0.10 22
rs4506565
TCF7L2
0.790 0.280 10 112996282 intron variant A/G;T snv 18
rs9939609
FTO
0.559 0.720 16 53786615 intron variant T/A snv 0.41 18
rs1800961
HNF4A
0.851 0.160 20 44413724 missense variant C/T snv 3.1E-02 2.5E-02 17
rs2074356
HECTD4
0.763 0.280 12 112207597 intron variant G/A snv 3.8E-03 9
rs2925979
CMIP
1.000 0.080 16 81501185 intron variant T/A;C snv 9
rs459193
C5orf67
0.925 0.120 5 56510924 downstream gene variant A/G snv 0.69 9
rs12229654 0.763 0.320 12 110976657 intergenic variant T/G snv 4.8E-03 7
rs7607980
COBLL1
1.000 0.080 2 164694691 missense variant T/C snv 0.11 0.13 7
rs11048456
LOC105369705
1.000 0.080 12 26310149 intron variant C/T snv 0.62 6
rs10184004 1.000 0.080 2 164651879 downstream gene variant C/T snv 0.48 5
rs2307111
POC5
0.925 0.120 5 75707853 missense variant T/A;C snv 4.5E-06; 0.47 5
rs2943641 0.763 0.160 2 226229029 intergenic variant T/C snv 0.67 5
rs3768321
PABPC4 ; PABPC4-AS1
1.000 0.080 1 39570256 intron variant G/T snv 0.14 5
rs2296172
MACF1
1.000 0.080 1 39370145 missense variant A/G;T snv 0.19; 8.0E-06 4
rs2972143 1.000 0.080 2 226251649 intergenic variant A/G snv 0.67 4
rs328
LPL
0.732 0.440 8 19962213 stop gained C/G snv 9.2E-02 9.0E-02 3
rs35169799
PLCB3
0.925 0.200 11 64263769 missense variant C/T snv 4.9E-02 4.5E-02 3
rs9686661
C5orf67
1.000 0.080 5 56565959 intron variant C/T snv 0.20 3
rs9687833
C5orf67
1.000 0.080 5 56565774 intron variant G/A snv 0.21 3
rs17513135
PABPC4 ; PABPC4-AS1
1.000 0.080 1 39570014 intron variant C/A;T snv 0.17 0.16 2