Disease: Glioblastoma Multiforme
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1005230
VEGFA
0.827 0.040 6 43768759 upstream gene variant T/C snv 0.60 5
rs10069690
TERT
0.595 0.560 5 1279675 intron variant C/T snv 0.36 53
rs1029044314
DDR1
0.851 0.040 6 30898095 missense variant G/A snv 4
rs10464870
CCDC26
0.882 0.040 8 129465577 intron variant C/T snv 0.80 3
rs104893877
SNCA
0.614 0.360 4 89828149 missense variant C/T snv 59
rs1057519902
H3-3A
0.742 0.160 1 226064451 missense variant G/C snv 16
rs1057519903
H3-3A
0.683 0.080 1 226064434 missense variant A/T snv 28
rs1057519904
H3C11
0.742 0.080 6 27872233 missense variant T/A snv 17
rs10852606
HEATR3
0.882 0.040 16 50094961 intron variant T/A;C snv 4
rs11196067
VTI1A
0.752 0.160 10 112709306 intron variant A/T snv 0.32 10
rs11233250
MIR4300HG
0.882 0.040 11 82685972 intron variant C/T snv 0.11 4
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 214
rs1135401891
BRCA2
0.790 0.280 13 32332796 frameshift variant -/CT ins 7
rs11670188
BTBD2
0.925 0.040 19 2014038 non coding transcript exon variant A/G snv 0.16 2
rs11860248
RBBP6
0.882 0.040 16 24566445 intron variant T/G snv 0.27 5
rs11979158
EGFR
0.882 0.040 7 55091656 intron variant A/G;T snv 0.20 5
rs1205454520
KLLN ; PTEN
0.763 0.120 10 87864059 5 prime UTR variant -/G delins 7.2E-06 10
rs121909218
PTEN
0.672 0.360 10 87933145 missense variant G/A snv 25
rs121912660
TP53
0.683 0.240 17 7673781 missense variant C/A;G;T snv 26
rs121913377
BRAF
0.354 0.840 7 140753335 missense variant CA/AT;TT mnv 480
rs121913444
EGFR
0.724 0.160 7 55191831 missense variant T/A;C;G snv 18
rs121913499
IDH1
0.605 0.520 2 208248389 missense variant G/A;C;T snv 51
rs121913503
IDH2
0.689 0.200 15 90088606 missense variant C/A;T snv 23
rs121918464
PTPN11
0.708 0.440 12 112450406 missense variant G/A;C snv 25
rs12230172
LOC105369844
0.882 0.040 12 75848895 intron variant A/G snv 0.48 4