Disease: Adenocarcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs113488022
BRAF
0.351 0.840 7 140753336 missense variant A/C;G;T snv 4.0E-06 490
rs121913377
BRAF
0.354 0.840 7 140753335 missense variant CA/AT;TT mnv 480
rs1045642
ABCB1
0.456 0.840 7 87509329 synonymous variant A/G;T snv 0.50 214
rs25487
XRCC1
0.441 0.800 19 43551574 missense variant T/C snv 0.68 0.71 205
rs121913529
KRAS
0.492 0.680 12 25245350 missense variant C/A;G;T snv 4.0E-06 144
rs2736100
TERT
0.550 0.880 5 1286401 3 prime UTR variant C/A snv 0.52 83
rs1136410
PARP1
0.559 0.760 1 226367601 missense variant A/G snv 0.21 0.15 70
rs2736098
TERT
0.600 0.600 5 1293971 synonymous variant C/T snv 0.29 0.22 48
rs833061
VEGFA
0.605 0.600 6 43769749 upstream gene variant C/G;T snv 42
rs28934575
TP53
0.641 0.400 17 7674230 missense variant C/A;G;T snv 37
rs1444669684
CDKN2B-AS1 ; CDKN2A
0.658 0.480 9 21994285 missense variant C/A;T snv 36
rs2853669
TERT
0.649 0.320 5 1295234 upstream gene variant A/G snv 0.25 35
rs121918464
PTPN11
0.708 0.440 12 112450406 missense variant G/A;C snv 25
rs4977756
CDKN2B-AS1
0.683 0.440 9 22068653 intron variant G/A snv 0.64 24
rs16906252
MGMT
0.732 0.200 10 129467281 synonymous variant C/T snv 5.5E-02 5.1E-02 19
rs121913444
EGFR
0.724 0.160 7 55191831 missense variant T/A;C;G snv 18
rs28929495
EGFR
0.807 0.120 7 55174014 missense variant G/A;C;T snv 9
rs753152604
CDK4
0.827 0.040 12 57751680 missense variant C/A snv 7