Disease: Non-Small Cell Lung Carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2847153
TYMS
0.925 0.080 18 661647 intron variant G/A snv 0.22 3
rs7164773
RORA
0.790 0.240 15 60775749 intron variant C/A;T snv 10
rs1805388
LIG4
0.790 0.120 13 108211243 missense variant G/A snv 0.18 0.16 11
rs3749474
TMEM165 ; CLOCK
0.724 0.320 4 55434518 3 prime UTR variant C/T snv 0.33 17
rs10165970
NPAS2
0.708 0.320 2 100840527 intron variant G/A snv 0.16 18
rs10519097
RORA
0.708 0.320 15 60997989 intron variant C/T snv 0.13 18
rs11943456
TMEM165
0.708 0.320 4 55410167 intron variant T/C snv 0.42 18
rs17024869
NPAS2
0.708 0.320 2 100843581 intron variant T/C snv 8.3E-02 18
rs2279115
BCL2
0.724 0.320 18 63319604 5 prime UTR variant G/A;T snv 18
rs7581886
NPAS2
0.708 0.320 2 100964784 intron variant C/T snv 0.92 18
rs1273593548
PIK3CG
0.716 0.160 7 106867593 missense variant T/G snv 8.4E-06 19
rs1805377
XRCC4
0.689 0.480 5 83353124 splice acceptor variant G/A snv 0.23 0.25 19
rs2853677
TERT
0.724 0.240 5 1287079 3 prime UTR variant G/A snv 0.63 19
rs895520
NPAS2
0.689 0.320 2 100961475 intron variant G/A snv 0.35 23
rs1870377
KDR
0.695 0.520 4 55106807 missense variant T/A snv 0.22 0.20 25
rs2298881
ERCC1
0.653 0.400 19 45423658 intron variant C/A;T snv 25
rs1805794
NBN
0.605 0.600 8 89978251 missense variant C/G snv 0.35 0.31 41
rs1138272
GSTP1
0.611 0.600 11 67586108 missense variant C/T snv 5.9E-02 5.5E-02 42
rs3212986
CD3EAP ; ERCC1
0.620 0.400 19 45409478 stop gained C/A;G;T snv 0.29; 4.3E-06; 4.3E-06 42
rs833061
VEGFA
0.605 0.600 6 43769749 upstream gene variant C/G;T snv 42
rs2736098
TERT
0.600 0.600 5 1293971 synonymous variant C/T snv 0.29 0.22 48
rs397517132
EGFR
0.623 0.280 7 55191846 missense variant A/T snv 48
rs17655
BIVM-ERCC5 ; ERCC5
0.597 0.560 13 102875652 missense variant G/C snv 0.28 0.30 52
rs5275
PTGS2
0.583 0.560 1 186673926 3 prime UTR variant A/G;T snv 55
rs11615
ERCC1
0.572 0.640 19 45420395 synonymous variant A/G snv 0.50 0.55 62