Disease: Glioblastoma Multiforme
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1005230
VEGFA
0.827 0.040 6 43768759 upstream gene variant T/C snv 0.60 5
rs10069690
TERT
0.595 0.560 5 1279675 intron variant C/T snv 0.36 53
rs1042522
TP53
0.426 0.800 17 7676154 missense variant G/C;T snv 0.67 242
rs1045642
ABCB1
0.456 0.840 7 87509329 synonymous variant A/G;T snv 0.50 214
rs10464870
CCDC26
0.882 0.040 8 129465577 intron variant C/T snv 0.80 3
rs1057519902
H3-3A
0.742 0.160 1 226064451 missense variant G/C snv 16
rs1057519903
H3-3A
0.683 0.080 1 226064434 missense variant A/T snv 28
rs10852606
HEATR3
0.882 0.040 16 50094961 intron variant T/A;C snv 4
rs11196067
VTI1A
0.752 0.160 10 112709306 intron variant A/T snv 0.32 10
rs11233250
MIR4300HG
0.882 0.040 11 82685972 intron variant C/T snv 0.11 4
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 214
rs113488022
BRAF
0.351 0.840 7 140753336 missense variant A/C;G;T snv 4.0E-06 490
rs1136410
PARP1
0.559 0.760 1 226367601 missense variant A/G snv 0.21 0.15 70
rs1138272
GSTP1
0.611 0.600 11 67586108 missense variant C/T snv 5.9E-02 5.5E-02 42
rs11554137
IDH1
0.742 0.040 2 208248468 synonymous variant G/A snv 5.1E-02 6.8E-02 13
rs11615
ERCC1
0.572 0.640 19 45420395 synonymous variant A/G snv 0.50 0.55 62
rs118101777
IDH2
0.614 0.280 15 90087472 missense variant C/T snv 2.0E-03 1.6E-03 42
rs11860248
RBBP6
0.882 0.040 16 24566445 intron variant T/G snv 0.27 5
rs11979158
EGFR
0.882 0.040 7 55091656 intron variant A/G;T snv 0.20 5
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs121912660
TP53
0.683 0.240 17 7673781 missense variant C/A;G;T snv 26
rs121913377
BRAF
0.354 0.840 7 140753335 missense variant CA/AT;TT mnv 480
rs121913499
IDH1
0.605 0.520 2 208248389 missense variant G/A;C;T snv 51
rs121913500
IDH1
0.529 0.600 2 208248388 missense variant C/A;G;T snv 4.0E-06 96
rs12230172
LOC105369844
0.882 0.040 12 75848895 intron variant A/G snv 0.48 4