DisGeNET - a database of gene-disease associations

List of associated variants

Glioma, C0017638

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1801394	FASTKD3 ; MTRR	0.531	0.840	5	7870860	missense variant	A/G	snv	0.47	0.45	101
rs1642785	TP53	0.807	0.200	17	7676483	5 prime UTR variant	G/A;C;T	snv	1.2E-05; 0.67; 2.8E-05		6
rs1800371	TP53	0.742	0.240	17	7676230	missense variant	G/A;T	snv	1.2E-03		15
rs1042522	TP53	0.426	0.800	17	7676154	missense variant	G/C;T	snv	0.67		242
rs1131691014	TP53	0.439	0.800	17	7676154	frameshift variant	-/C	ins			214
rs878854066	TP53	0.439	0.800	17	7676153	missense variant	GG/AC	mnv			213
rs35850753	TP53	0.807	0.080	17	7675353	5 prime UTR variant	C/T	snv		1.3E-02	8
rs1625895	TP53	0.752	0.200	17	7674797	non coding transcript exon variant	T/A;C;G	snv	9.1E-06; 0.86; 4.5E-06		13
rs28934575	TP53	0.641	0.400	17	7674230	missense variant	C/A;G;T	snv			37
rs121912660	TP53	0.683	0.240	17	7673781	missense variant	C/A;G;T	snv			26
rs55819519	TP53	0.627	0.400	17	7673751	missense variant	C/A;G;T	snv	1.6E-04	1.3E-04	40
rs78378222	TP53	0.662	0.360	17	7668434	3 prime UTR variant	T/G	snv		8.3E-03	37
rs1801591	ETFA	0.882	0.040	15	76286421	missense variant	G/A	snv	7.4E-02	6.4E-02	4
rs77633900	ETFA	1.000	0.040	15	76246118	intron variant	G/C	snv		6.3E-02	2
rs1275600	LOC105369844	1.000	0.040	12	75869771	intron variant	T/A	snv		0.47	2
rs12230172	LOC105369844	0.882	0.040	12	75848895	intron variant	A/G	snv		0.48	4
rs3213801	POLK	0.882	0.080	5	75581441	synonymous variant	C/T	snv	0.24	0.22	3
rs5744533	POLK ; CERT1	0.807	0.120	5	75510279	intron variant	C/A;T	snv			6
rs61757955	GRB2	1.000	0.040	17	75318086	3 prime UTR variant	A/G	snv		4.2E-02	2
rs8753	POLR2A	1.000	0.040	17	7514323	non coding transcript exon variant	C/T	snv		1.4E-02	2
rs147960238	CD163	1.000	0.040	12	7485786	intron variant	T/C	snv		8.3E-03	1
rs1409785		1.000	0.040	1	74782438	intergenic variant	G/A	snv		0.65	2
rs2562152	RHBDF1	0.882	0.040	16	73898	intron variant	A/T	snv		0.67	4
rs2227306	CXCL8	0.677	0.680	4	73741338	intron variant	C/T	snv		0.31	21
rs4073	CXCL8	0.566	0.800	4	73740307	upstream gene variant	A/T	snv		0.46	64